C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006TM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122696-ENSG00000107338 CGP 9606 9:37879400-38069211
GeneTranscriptPositionBiotype
ENSG00000107338 (SHB)
Src homology 2 domain containing adaptor protein B 		ENST00000377707 (SHB-001) 37919134-38069211 protein_coding
ENSG00000213839 (TMX2P1)
thioredoxin-related transmembrane protein 2 pseudogene 1 		ENST00000436507 (TMX2P1-001) 37885683-37886390 processed_pseudogene
ENSG00000251745 (RNU7-124P)
RNA, U7 small nuclear 124 pseudogene 		ENST00000515936 (RNU7-124P-201) 37936707-37936768 snRNA
CIL_0006TM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045973-ENSMUSG00000044813 CGP 10090 4:45395923-45532470
GeneTranscriptPositionBiotype
ENSMUSG00000044813 (Shb)
src homology 2 domain-containing transforming protein B 		ENSMUST00000061986 (Shb-001) 45423278-45530330 protein_coding
ENSMUST00000125599 (Shb-006) 45447506-45489403 retained_intron
ENSMUST00000130107 (Shb-004) 45444706-45492841 processed_transcript
ENSMUST00000146236 (Shb-005) 45458129-45489794 protein_coding
ENSMUST00000147448 (Shb-003) 45458320-45532470 protein_coding
ENSMUST00000147926 (Shb-002) 45423278-45482802 processed_transcript
ENSMUSG00000045973 (Slc25a51)
solute carrier family 25, member 51 		ENSMUST00000107796 (Slc25a51-001) 45395923-45408761 protein_coding
ENSMUST00000116341 (Slc25a51-201) 45395923-45408766 protein_coding
ENSMUST00000132815 (Slc25a51-003) 45399241-45408760 protein_coding
ENSMUST00000134714 (Slc25a51-002) 45407172-45408735 processed_transcript
ENSMUST00000151516 (Slc25a51-005) 45399602-45404866 protein_coding
ENSMUST00000153904 (Slc25a51-004) 45399572-45408646 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006TM_0001ENSG00000107338ENST00000377707ENSG00000213839ENST00000436507ENSG00000251745ENST00000515936CIL_0006TM_0002ENSMUSG00000044813ENSMUST00000061986ENSMUST00000125599ENSMUST00000130107ENSMUST00000146236ENSMUST00000147448ENSMUST00000147926ENSMUSG00000045973ENSMUST00000107796ENSMUST00000116341ENSMUST00000132815ENSMUST00000134714ENSMUST00000151516ENSMUST00000153904
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006TM_0001ENSG00000107338ENST00000377707ENSG00000213839ENST00000436507ENSG00000251745ENST00000515936CIL_0006TM_0002ENSMUSG00000044813ENSMUST00000061986ENSMUST00000125599ENSMUST00000146236ENSMUST00000147926ENSMUSG00000045973ENSMUST00000107796ENSMUST00000116341ENSMUST00000132815ENSMUST00000151516
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107338 ENST00000377707 N/A N/A 3.856±0.00 16.259±0.00 N/A 5.757±0.00 6.793±4.66 5.740±0.00 11.079±6.60 19.158±16.74 N/A 16.470±7.02 12.770±1.22 N/A
ENSG00000213839 ENST00000436507 N/A 3.036±0.00 0.809±0.00 4.370±1.79 5.054±0.73 2.524±0.75 1.745±0.16 3.257±0.00 1.591±1.13 1.658±0.62 1.521±0.77 3.224±2.56 0.789±0.10 1.527±1.20
ENSG00000251745 ENST00000515936 N/A N/A N/A 1.184±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044813 ENSMUST00000061986 6.339±0.97 31.324±5.54 12.211±0.50 8.376±4.31 7.912±1.10 14.503±1.46 5.923±0.64 18.793±3.50 9.216±5.09 13.249±1.66 1.120±0.17 10.194±4.19 7.732±4.16 2.316±1.09
ENSMUST00000125599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.507±0.04 N/A N/A N/A
ENSMUST00000130107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146236 N/A N/A N/A 9.402±0.00 N/A N/A N/A N/A N/A N/A N/A 12.193±0.00 25.841±4.17 3.094±0.00
ENSMUST00000147448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147926 N/A N/A N/A N/A N/A N/A N/A N/A 8.817±2.71 N/A N/A N/A N/A N/A
ENSMUSG00000045973 ENSMUST00000107796 9.830±4.78 46.924±5.81 12.906±2.89 11.705±1.93 16.878±3.17 9.951±2.34 4.002±0.49 14.893±6.75 22.832±10.15 13.478±8.40 6.846±3.51 17.526±3.21 11.848±4.89 1.037±0.63
ENSMUST00000116341 7.515±1.80 N/A 7.707±2.09 7.885±0.00 N/A N/A 3.180±0.36 8.346±0.00 7.916±5.21 N/A 7.453±3.48 12.919±0.00 7.012±5.84 0.646±0.38
ENSMUST00000132815 31.401±4.12 21.852±0.00 N/A 23.234±1.42 22.788±6.95 8.236±1.35 14.211±1.03 26.538±6.35 17.750±12.36 20.587±6.05 14.027±1.57 10.552±0.83 32.421±4.36 3.104±0.34
ENSMUST00000134714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151516 N/A 72.981±13.03 N/A N/A 24.565±0.86 18.651±4.42 N/A 30.358±0.00 15.342±0.00 25.274±2.92 N/A 31.820±3.49 N/A N/A
ENSMUST00000153904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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