C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type XI, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427239 COL11A1-002 ENSG00000060718 9606 - 1:103008473-103108178 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLungENST00000427239
Transcript ID Bladder Breast Kidney Lung
ENST00000427239 0.041±0.00 1.287±0.00 0.064±0.00 0.136±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072Y CIL_00072Y_0003 CGP 1:101802574-103108496
CIL_00072Z CIL_00072Z_0002 CGP 1:102876467-103555239

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123619 Col11a1-004 protein_coding Mus_musculus 0 1905
ENSMUST00000092155 Col11a1-001 protein_coding Mus_musculus 0 900

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