C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00079U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000077264-ENSG00000077274 CGP 9606 X:110944285-111270523
GeneTranscriptPositionBiotype
ENSG00000077264 (PAK3)
p21 protein (Cdc42/Rac)-activated kinase 3
ENST00000262836 (PAK3-201) 111123077-111220918 protein_coding
ENST00000360648 (PAK3-202) 111123077-111220918 protein_coding
ENST00000372007 (PAK3-001) 111096377-111227361 protein_coding
ENST00000372010 (PAK3-002) 111096360-111220931 protein_coding
ENST00000417227 (PAK3-203) 111123077-111220918 protein_coding
ENST00000425146 (PAK3-204) 110944285-111220918 protein_coding
ENST00000429193 (PAK3-003) 111123076-111152416 protein_coding
ENST00000446737 (PAK3-205) 110944285-111220918 protein_coding
ENST00000484442 (PAK3-004) 111096325-111098786 processed_transcript
ENST00000487802 (PAK3-005) 111142143-111152762 processed_transcript
ENST00000518291 (PAK3-007) 111097387-111220447 protein_coding
ENST00000519681 (PAK3-006) 111096360-111220945 protein_coding
ENST00000620137 (PAK3-206) 111096147-111220945 protein_coding
ENSG00000077274 (CAPN6)
calpain 6
ENST00000324068 (CAPN6-001) 111245103-111270523 protein_coding
CIL_00079U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031284-ENSMUSG00000067276 CGP 10090 X:143518591-143827414
GeneTranscriptPositionBiotype
ENSMUSG00000031284 (Pak3)
p21 protein (Cdc42/Rac)-activated kinase 3
ENSMUST00000033640 (Pak3-008) 143518591-143797792 protein_coding
ENSMUST00000112863 (Pak3-001) 143665745-143797792 protein_coding
ENSMUST00000112864 (Pak3-002) 143665745-143797792 protein_coding
ENSMUST00000112865 (Pak3-004) 143664579-143797792 protein_coding
ENSMUST00000112868 (Pak3-005) 143664290-143797792 protein_coding
ENSMUST00000126592 (Pak3-003) 143664373-143693384 protein_coding
ENSMUST00000134402 (Pak3-009) 143518698-143765378 protein_coding
ENSMUST00000155215 (Pak3-007) 143664526-143733143 protein_coding
ENSMUST00000156449 (Pak3-006) 143664391-143716145 protein_coding
ENSMUST00000172330 (Pak3-201) 143693286-143797796 protein_coding
ENSMUSG00000067276 (Capn6)
calpain 6
ENSMUST00000087316 (Capn6-001) 143802231-143827414 protein_coding
ENSMUST00000151154 (Capn6-002) 143816062-143827332 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079U_0001ENSG00000077264ENST00000262836ENST00000360648ENST00000372007ENST00000372010ENST00000417227ENST00000425146ENST00000429193ENST00000446737ENST00000484442ENST00000487802ENST00000518291ENST00000519681ENST00000620137ENSG00000077274ENST00000324068CIL_00079U_0002ENSMUSG00000031284ENSMUST00000033640ENSMUST00000112863ENSMUST00000112864ENSMUST00000112865ENSMUST00000112868ENSMUST00000126592ENSMUST00000134402ENSMUST00000155215ENSMUST00000156449ENSMUST00000172330ENSMUSG00000067276ENSMUST00000087316ENSMUST00000151154
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079U_0001ENSG00000077264ENST00000262836ENST00000372007ENST00000372010ENST00000425146ENST00000429193ENST00000487802ENST00000518291ENST00000620137ENSG00000077274ENST00000324068CIL_00079U_0002ENSMUSG00000031284ENSMUST00000033640ENSMUST00000112864ENSMUST00000112865ENSMUST00000112868ENSMUST00000126592ENSMUST00000134402ENSMUST00000155215ENSMUST00000156449ENSMUST00000172330ENSMUSG00000067276ENSMUST00000087316
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077264 ENST00000262836 N/A N/A N/A 8.552±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000360648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372007 0.098±0.00 0.131±0.00 0.014±0.00 1.592±0.00 0.411±0.00 N/A 0.031±0.00 N/A 0.092±0.00 0.131±0.03 0.011±0.00 0.174±0.17 0.037±0.01 1.029±0.07
ENST00000372010 N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A N/A N/A
ENST00000417227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425146 N/A N/A 0.030±0.00 N/A 0.221±0.00 0.192±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429193 N/A 0.494±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A
ENST00000518291 N/A N/A 0.166±0.00 N/A N/A N/A 0.023±0.00 N/A 0.554±0.00 0.466±0.00 N/A N/A 0.200±0.00 N/A
ENST00000519681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620137 N/A N/A N/A 5.291±0.00 0.269±0.00 N/A N/A 0.024±0.00 0.261±0.00 N/A N/A 0.103±0.00 0.151±0.12 0.593±0.00
ENSG00000077274 ENST00000324068 0.100±0.00 0.759±0.00 0.359±0.00 N/A 2.897±1.15 1.020±0.29 0.023±0.00 1.826±1.81 0.235±0.11 0.268±0.07 0.221±0.07 1.157±1.02 76.694±19.12 5.966±5.71
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031284 ENSMUST00000033640 0.086±0.00 N/A N/A 1.514±0.27 0.174±0.05 0.016±0.00 0.035±0.02 0.023±0.00 N/A N/A N/A 0.474±0.08 N/A N/A
ENSMUST00000112863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112864 N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A N/A N/A 0.978±0.49 N/A 0.318±0.11
ENSMUST00000112865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.729±0.30 N/A 0.283±0.00
ENSMUST00000112868 0.096±0.00 0.191±0.00 N/A N/A N/A N/A N/A 0.005±0.00 0.003±0.00 0.069±0.00 0.003±0.00 1.498±0.91 0.009±0.01 0.253±0.00
ENSMUST00000126592 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A 2.815±0.00 N/A 6.005±1.14
ENSMUST00000134402 N/A N/A N/A N/A 0.197±0.00 N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 5.318±0.00
ENSMUST00000155215 N/A 0.084±0.00 N/A N/A N/A N/A 0.093±0.00 0.062±0.00 N/A N/A N/A N/A 0.032±0.00 N/A
ENSMUST00000156449 N/A 0.440±0.12 N/A N/A 0.194±0.02 N/A 0.116±0.00 0.076±0.02 N/A N/A N/A N/A N/A N/A
ENSMUST00000172330 0.063±0.01 0.278±0.19 0.380±0.12 8.876±2.04 0.117±0.05 0.096±0.04 0.031±0.01 0.019±0.01 0.020±0.01 0.093±0.00 0.010±0.00 1.896±0.90 0.008±0.00 0.504±0.07
ENSMUSG00000067276 ENSMUST00000087316 1.832±1.56 0.104±0.06 2.427±0.08 2.045±1.30 0.511±0.29 0.428±0.13 0.438±0.06 0.680±0.10 5.036±5.02 1.039±0.18 0.752±0.20 1.202±0.29 2.983±1.56 2.266±0.97
ENSMUST00000151154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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