C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhomboid 5 homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590168 RHBDF2-006 ENSG00000129667 9606 - 17:76470891-76477731 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000590168
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000590168 11.861±0.00 0.380±0.00 1.511±0.86 1.258±0.39 2.153±0.00 1.265±1.10 0.638±0.29 2.991±1.91 0.248±0.00 4.311±3.54 2.326±0.00 1.185±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EV CIL_0007EV_0001 CGP 17:76453351-76501790
CIL_0000CA CIL_0000CA_0001 CGP 17:76470891-76551175

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103028 Rhbdf2-001 protein_coding Mus_musculus 0 1362
ENSMUST00000103029 Rhbdf2-003 protein_coding Mus_musculus 0 1362
ENSMUST00000138125 Rhbdf2-004 processed_transcript Mus_musculus 0 582
ENSMUST00000126819 Rhbdf2-002 retained_intron Mus_musculus 0 446

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