C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhomboid 5 homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591885 RHBDF2-002 ENSG00000129667 9606 - 17:76471069-76501790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000591885
Transcript ID Brain
ENST00000591885 0.847±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EV CIL_0007EV_0001 CGP 17:76453351-76501790
CIL_0000CA CIL_0000CA_0001 CGP 17:76470891-76551175

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005789 ISS endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0006508 IEA proteolysis
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0019838 IEA growth factor binding
GO:0050709 ISS negative regulation of protein secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103028 Rhbdf2-001 protein_coding Mus_musculus 0 2926
ENSMUST00000103029 Rhbdf2-003 protein_coding Mus_musculus 0 2926
ENSMUST00000126819 Rhbdf2-002 retained_intron Mus_musculus 0 924
ENSMUST00000138125 Rhbdf2-004 processed_transcript Mus_musculus 0 582

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