C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007F4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000012519-ENSDARG00000025949 CGP 7955 8:8043459-8140332
GeneTranscriptPositionBiotype
ENSDARG00000012519 (hcfc1b)
host cell factor C1b 		ENSDART00000019533 (hcfc1b-201) 8043460-8102510 protein_coding
ENSDART00000132536 (hcfc1b-001) 8043459-8104447 protein_coding
ENSDART00000138323 (hcfc1b-002) 8045124-8051296 retained_intron
CIL_0007F4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031386-ENSMUSG00000031392 CGP 10090 X:73942792-74023918
GeneTranscriptPositionBiotype
ENSMUSG00000031386 (Hcfc1)
host cell factor C1 		ENSMUST00000033761 (Hcfc1-001) 73942792-73966357 protein_coding
ENSMUST00000114372 (Hcfc1-005) 73942797-73966351 protein_coding
ENSMUST00000128136 (Hcfc1-002) 73942795-73949253 protein_coding
ENSMUST00000128325 (Hcfc1-008) 73955121-73957429 processed_transcript
ENSMUST00000131091 (Hcfc1-006) 73947195-73948346 processed_transcript
ENSMUST00000156204 (Hcfc1-007) 73945321-73947432 retained_intron
ENSMUSG00000031392 (Irak1)
interleukin-1 receptor-associated kinase 1 		ENSMUST00000033769 (Irak1-003) 74014971-74023913 protein_coding
ENSMUST00000068286 (Irak1-005) 74013926-74023915 protein_coding
ENSMUST00000101458 (Irak1-009) 74015440-74023745 protein_coding
ENSMUST00000114352 (Irak1-004) 74013918-74023915 protein_coding
ENSMUST00000114353 (Irak1-008) 74015440-74023745 protein_coding
ENSMUST00000114354 (Irak1-001) 74013914-74023918 protein_coding
ENSMUST00000114360 (Irak1-006) 74013926-74023915 protein_coding
ENSMUST00000124417 (Irak1-017) 74022229-74022944 protein_coding
ENSMUST00000124580 (Irak1-016) 74022187-74023173 protein_coding
ENSMUST00000126583 (Irak1-019) 74017130-74022496 protein_coding
ENSMUST00000128436 (Irak1-021) 74015372-74019941 protein_coding
ENSMUST00000128759 (Irak1-011) 74023095-74023831 retained_intron
ENSMUST00000132144 (Irak1-010) 74021000-74023091 protein_coding
ENSMUST00000138397 (Irak1-022) 74016548-74020988 protein_coding
ENSMUST00000140130 (Irak1-018) 74021000-74022651 retained_intron
ENSMUST00000144353 (Irak1-014) 74022746-74023508 processed_transcript
ENSMUST00000145677 (Irak1-012) 74022618-74023808 retained_intron
ENSMUST00000146210 (Irak1-015) 74022633-74023376 retained_intron
ENSMUST00000148317 (Irak1-020) 74015358-74018334 protein_coding
ENSMUST00000148706 (Irak1-002) 74014806-74023826 retained_intron
ENSMUST00000149809 (Irak1-013) 74022238-74023727 processed_transcript
ENSMUST00000149871 (Irak1-007) 74014806-74023826 retained_intron
ENSMUSG00000080829 (Gm8545)
predicted gene 8545 		ENSMUST00000120692 (Gm8545-001) 74006702-74007502 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007F4_0001ENSDARG00000012519ENSDART00000019533ENSDART00000132536ENSDART00000138323CIL_0007F4_0002ENSMUSG00000031386ENSMUST00000033761ENSMUST00000114372ENSMUST00000128136ENSMUST00000128325ENSMUST00000131091ENSMUST00000156204ENSMUSG00000031392ENSMUST00000033769ENSMUST00000068286ENSMUST00000101458ENSMUST00000114352ENSMUST00000114353ENSMUST00000114354ENSMUST00000114360ENSMUST00000124417ENSMUST00000124580ENSMUST00000126583ENSMUST00000128436ENSMUST00000128759ENSMUST00000132144ENSMUST00000138397ENSMUST00000140130ENSMUST00000144353ENSMUST00000145677ENSMUST00000146210ENSMUST00000148317ENSMUST00000148706ENSMUST00000149809ENSMUST00000149871ENSMUSG00000080829ENSMUST00000120692
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007F4_0001ENSDARG00000012519ENSDART00000019533ENSDART00000132536CIL_0007F4_0002ENSMUSG00000031386ENSMUST00000033761ENSMUST00000114372ENSMUST00000128136ENSMUSG00000031392ENSMUST00000033769ENSMUST00000068286ENSMUST00000101458ENSMUST00000114352ENSMUST00000114354ENSMUST00000114360ENSMUST00000128436ENSMUST00000132144ENSMUST00000145677ENSMUST00000148706ENSMUST00000149871ENSMUSG00000080829ENSMUST00000120692
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012519 ENSDART00000019533 N/A N/A N/A 5.789±2.54 N/A N/A 4.362±2.74 1.396±0.71 0.845±0.00 N/A 2.486±0.00 N/A N/A N/A
ENSDART00000132536 N/A N/A N/A 2.936±2.16 N/A N/A N/A 2.181±0.00 0.386±0.00 N/A 0.696±0.00 N/A N/A N/A
ENSDART00000138323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031386 ENSMUST00000033761 9.593±5.12 22.763±5.49 2.196±0.93 8.867±3.18 10.758±5.75 15.172±1.76 4.692±0.70 7.380±1.49 6.508±4.58 13.592±2.11 3.890±1.30 15.598±4.41 9.382±6.93 2.533±0.25
ENSMUST00000114372 3.380±2.28 4.485±1.03 N/A 4.561±1.58 3.225±0.56 3.309±0.68 2.025±0.34 2.334±0.89 2.722±1.08 3.774±0.00 1.581±0.48 4.063±1.33 5.994±2.14 0.782±0.31
ENSMUST00000128136 4.392±1.17 N/A 4.587±1.35 4.364±1.71 N/A N/A N/A 3.387±0.42 5.568±2.21 N/A 1.821±0.00 3.872±0.00 3.837±0.61 N/A
ENSMUST00000128325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031392 ENSMUST00000033769 9.116±0.68 N/A N/A 5.001±0.00 7.694±0.57 N/A 5.429±0.38 5.298±1.03 3.117±0.63 N/A N/A 17.265±8.00 5.376±3.97 0.819±0.00
ENSMUST00000068286 N/A 35.075±7.55 N/A N/A 19.775±5.91 9.835±0.00 N/A N/A N/A N/A N/A 27.159±5.29 N/A 0.979±0.07
ENSMUST00000101458 N/A N/A N/A 8.247±0.00 N/A N/A N/A N/A N/A N/A N/A 14.482±0.00 8.062±0.00 0.774±0.29
ENSMUST00000114352 N/A N/A 10.416±0.17 3.540±1.38 5.268±0.00 7.120±0.00 N/A N/A 4.591±1.22 N/A 5.068±0.00 10.356±1.87 4.061±0.98 0.200±0.00
ENSMUST00000114353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114354 14.967±2.85 24.252±2.04 14.506±2.77 5.541±2.35 13.289±1.16 9.650±1.64 10.114±1.81 10.889±0.60 7.123±1.65 12.044±1.69 10.011±2.31 12.239±2.87 6.295±4.63 1.265±0.45
ENSMUST00000114360 19.475±4.17 29.664±0.00 N/A N/A 19.191±4.59 18.039±3.63 6.634±1.88 10.672±3.43 8.816±1.11 16.658±1.34 N/A 29.386±9.46 N/A 1.422±0.63
ENSMUST00000124417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128436 N/A N/A N/A 32.027±0.00 N/A N/A N/A N/A N/A N/A N/A 77.703±0.00 42.696±16.19 N/A
ENSMUST00000128759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.701±0.00
ENSMUST00000138397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145677 N/A 87.378±29.99 N/A N/A 41.791±11.57 21.441±4.36 N/A N/A 10.383±2.23 17.265±2.73 N/A 46.192±13.30 N/A N/A
ENSMUST00000146210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148706 N/A N/A N/A 5.390±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.564±0.00 N/A
ENSMUST00000149809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149871 N/A N/A N/A N/A 6.060±0.00 N/A N/A N/A 3.222±0.35 6.383±0.79 N/A 10.076±0.07 2.952±1.40 0.682±0.00
ENSMUSG00000080829 ENSMUST00000120692 0.067±0.00 N/A N/A 0.052±0.03 N/A 0.145±0.00 N/A N/A 0.019±0.01 N/A N/A N/A 0.099±0.07 N/A

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