C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007ZS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2346 VISTA 9606 4:23630438-24232069
GeneTranscriptPositionBiotype
ENSG00000109819 (PPARGC1A)
peroxisome proliferator-activated receptor gamma, coactivator 1 alpha 		ENST00000264867 (PPARGC1A-001) 23792021-23890077 protein_coding
ENST00000503714 (PPARGC1A-014) 23875782-23884931 processed_transcript
ENST00000505469 (PPARGC1A-009) 23877696-23882113 retained_intron
ENST00000506055 (PPARGC1A-007) 23795698-23890032 nonsense_mediated_decay
ENST00000507342 (PPARGC1A-003) 23831707-23899318 processed_transcript
ENST00000507380 (PPARGC1A-004) 23882679-23890035 protein_coding
ENST00000508380 (PPARGC1A-011) 23828562-23882111 processed_transcript
ENST00000509642 (PPARGC1A-005) 23814389-23882132 processed_transcript
ENST00000509702 (PPARGC1A-006) 23755041-23882111 processed_transcript
ENST00000512169 (PPARGC1A-012) 23831529-23882132 processed_transcript
ENST00000513205 (PPARGC1A-008) 23814333-23890035 nonsense_mediated_decay
ENST00000514479 (PPARGC1A-013) 23828490-23829671 retained_intron
ENST00000514494 (PPARGC1A-002) 23884499-23904089 retained_intron
ENST00000514517 (PPARGC1A-010) 23881088-23882103 processed_transcript
ENST00000515534 (PPARGC1A-015) 23866120-23890029 processed_transcript
ENST00000612355 (PPARGC1A-201) 23824372-23890077 protein_coding
ENST00000613098 (PPARGC1A-202) 23795339-23881292 protein_coding
ENST00000617484 (PPARGC1A-203) 23820610-23890077 protein_coding
ENSG00000249453 (RP13-497K6.1)
 ENST00000506514 (RP13-497K6.1-001) 23779590-23782560 antisense
ENSG00000250137 (RP11-380P13.1)
 ENST00000499715 (RP11-380P13.1-002) 23762927-23768625 antisense
ENST00000514290 (RP11-380P13.1-001) 23560923-23768652 antisense
ENSG00000251292 (ERVH-1)
endogenous retrovirus group H, member 1 		ENST00000507666 (ERVH-1-001) 23723262-23733579 lincRNA
CIL_0007ZS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2346 VISTA 10090 5:51291179-51892760
GeneTranscriptPositionBiotype
ENSMUSG00000029167 (Ppargc1a)
peroxisome proliferative activated receptor, gamma, coactivator 1 alpha 		ENSMUST00000031059 (Ppargc1a-002) 51457982-51553857 nonsense_mediated_decay
ENSMUST00000127135 (Ppargc1a-004) 51498141-51567724 protein_coding
ENSMUST00000132734 (Ppargc1a-001) 51454249-51553921 protein_coding
ENSMUST00000151104 (Ppargc1a-003) 51490200-51567725 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ZS_0001ENSG00000109819ENST00000264867ENST00000503714ENST00000505469ENST00000506055ENST00000507342ENST00000507380ENST00000508380ENST00000509642ENST00000509702ENST00000512169ENST00000513205ENST00000514479ENST00000514494ENST00000514517ENST00000515534ENST00000612355ENST00000613098ENST00000617484ENSG00000249453ENST00000506514ENSG00000250137ENST00000499715ENST00000514290ENSG00000251292ENST00000507666CIL_0007ZS_0002ENSMUSG00000029167ENSMUST00000031059ENSMUST00000127135ENSMUST00000132734ENSMUST00000151104
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ZS_0001ENSG00000109819ENST00000264867ENST00000506055ENST00000507380ENST00000514479ENST00000612355ENST00000613098ENSG00000249453ENST00000506514ENSG00000250137ENST00000499715ENST00000514290ENSG00000251292ENST00000507666CIL_0007ZS_0002ENSMUSG00000029167ENSMUST00000031059ENSMUST00000127135ENSMUST00000132734ENSMUST00000151104
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109819 ENST00000264867 1.030±0.00 1.111±0.00 12.005±0.00 2.330±0.80 0.378±0.00 2.128±0.00 8.293±5.05 7.411±4.14 0.772±0.01 0.628±0.00 3.904±0.00 1.345±0.80 0.034±0.02 0.321±0.00
ENST00000503714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506055 N/A N/A N/A 1.656±0.00 0.691±0.00 5.016±0.00 1.959±0.00 N/A N/A 0.403±0.00 6.279±0.00 N/A 0.009±0.00 N/A
ENST00000507342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507380 N/A N/A N/A N/A 0.467±0.00 N/A 2.792±0.00 3.370±0.00 N/A N/A 7.220±0.00 N/A N/A N/A
ENST00000508380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.173±0.01 N/A
ENST00000514494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612355 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.291±0.00 N/A N/A N/A N/A
ENST00000613098 N/A N/A N/A N/A N/A N/A 2.027±0.00 5.572±0.00 0.482±0.00 N/A N/A N/A N/A N/A
ENST00000617484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249453 ENST00000506514 N/A N/A 1.312±0.00 0.085±0.00 N/A N/A 0.178±0.00 0.917±0.00 N/A 0.670±0.00 N/A 0.149±0.00 N/A N/A
ENSG00000250137 ENST00000499715 0.046±0.00 0.253±0.00 N/A 0.266±0.00 N/A 0.140±0.00 0.065±0.00 1.687±0.00 0.081±0.00 N/A 0.146±0.04 0.175±0.17 N/A 0.021±0.00
ENST00000514290 N/A N/A N/A 0.153±0.00 0.482±0.00 0.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251292 ENST00000507666 1.079±0.00 2.865±0.00 0.593±0.00 0.880±0.79 1.386±0.38 0.258±0.08 0.203±0.08 1.146±0.41 0.342±0.00 0.140±0.00 0.187±0.00 0.312±0.17 0.442±0.25 1.050±0.50
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029167 ENSMUST00000031059 0.415±0.06 0.329±0.13 0.229±0.00 N/A 0.912±0.65 2.414±0.57 5.412±0.26 4.325±1.33 0.310±0.08 0.223±0.05 1.433±0.00 0.323±0.04 0.286±0.00 0.190±0.03
ENSMUST00000127135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 N/A
ENSMUST00000132734 0.458±0.26 0.244±0.07 0.355±0.12 1.967±0.77 0.521±0.12 1.756±0.37 7.367±0.53 6.742±0.68 1.011±0.67 0.774±0.31 3.367±1.05 0.205±0.12 0.335±0.33 N/A
ENSMUST00000151104 0.691±0.15 0.513±0.26 N/A N/A 0.972±0.28 4.308±1.07 N/A N/A 0.969±0.06 0.592±0.13 N/A 1.137±0.50 N/A N/A

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