C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00088S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs823 VISTA 9606 13:78698125-79299456
GeneTranscriptPositionBiotype
ENSG00000215357 (HSPD1P8)
heat shock 60kDa protein 1 (chaperonin) pseudogene 8 		ENST00000400121 (HSPD1P8-001) 78849231-78851208 processed_pseudogene
ENSG00000225427 (LINC00331)
long intergenic non-protein coding RNA 331 		ENST00000446391 (LINC00331-001) 78787319-78792307 lincRNA
ENSG00000226670 (BCAS2P3)
breast carcinoma amplified sequence 2 pseudogene 3 		ENST00000416374 (BCAS2P3-001) 79166119-79166885 processed_pseudogene
ENSG00000230584 (CCT5P2)
chaperonin containing TCP1, subunit 5 (epsilon) pseudogene 2 		ENST00000432974 (CCT5P2-001) 78908919-78910542 processed_pseudogene
ENSG00000236277 (NIPA2P5)
non imprinted in Prader-Willi/Angelman syndrome 2 pseudogene 5 		ENST00000452282 (NIPA2P5-001) 79090783-79094119 processed_pseudogene
ENSG00000237109 (RPL21P111)
ribosomal protein L21 pseudogene 111 		ENST00000418453 (RPL21P111-001) 78761175-78761651 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00088S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs823 VISTA 10090 14:104534243-105135529
GeneTranscriptPositionBiotype
ENSMUSG00000022119 (Rbm26)
RNA binding motif protein 26 		ENSMUST00000022715 (Rbm26-007) 105115063-105177327 protein_coding
ENSMUST00000100327 (Rbm26-001) 105114986-105177323 protein_coding
ENSMUST00000163499 (Rbm26-002) 105116135-105177264 protein_coding
ENSMUST00000163545 (Rbm26-006) 105114965-105176860 protein_coding
ENSMUST00000172122 (Rbm26-004) 105106751-105130337 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00088S_0001ENSG00000215357ENST00000400121ENSG00000225427ENST00000446391ENSG00000226670ENST00000416374ENSG00000230584ENST00000432974ENSG00000236277ENST00000452282ENSG00000237109ENST00000418453CIL_00088S_0002ENSMUSG00000022119ENSMUST00000022715ENSMUST00000100327ENSMUST00000163499ENSMUST00000163545ENSMUST00000172122
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00088S_0001ENSG00000215357ENST00000400121ENSG00000225427ENST00000446391ENSG00000226670ENST00000416374ENSG00000230584ENST00000432974ENSG00000236277ENST00000452282ENSG00000237109ENST00000418453CIL_00088S_0002ENSMUSG00000022119ENSMUST00000022715ENSMUST00000100327ENSMUST00000163499ENSMUST00000163545ENSMUST00000172122
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000215357 ENST00000400121 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A 0.018±0.01
ENSG00000225427 ENST00000446391 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.523±0.19
ENSG00000226670 ENST00000416374 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A N/A
ENSG00000230584 ENST00000432974 0.016±0.00 0.016±0.00 N/A N/A N/A 0.007±0.00 0.007±0.00 0.008±0.00 N/A 0.160±0.00 0.078±0.00 N/A N/A 0.014±0.00
ENSG00000236277 ENST00000452282 N/A 0.024±0.00 N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237109 ENST00000418453 0.125±0.00 0.231±0.00 N/A 0.025±0.00 0.123±0.00 0.047±0.00 N/A 0.025±0.00 N/A 0.093±0.00 0.046±0.00 0.282±0.24 N/A 0.114±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022119 ENSMUST00000022715 3.586±2.52 3.357±1.16 N/A 5.637±0.65 2.496±1.09 2.545±0.66 1.516±0.16 1.242±0.09 1.694±0.37 3.689±1.46 1.050±0.12 8.033±3.80 10.229±0.00 14.102±8.61
ENSMUST00000100327 1.805±1.15 8.333±2.71 N/A N/A 4.887±2.18 4.043±1.93 0.711±0.00 1.632±0.32 1.257±0.67 1.714±0.46 N/A 10.183±1.89 4.819±1.32 2.839±0.21
ENSMUST00000163499 0.776±0.00 N/A N/A N/A N/A N/A N/A 0.781±0.00 N/A 1.003±0.02 N/A N/A 1.761±0.41 N/A
ENSMUST00000163545 N/A 2.862±0.07 N/A 2.245±0.00 2.102±0.43 1.529±0.00 1.177±0.00 N/A N/A 2.004±0.00 N/A 3.709±1.24 3.331±0.00 N/A
ENSMUST00000172122 N/A N/A 4.374±0.87 7.718±4.49 N/A N/A N/A N/A 4.856±1.69 2.836±0.15 1.349±0.28 2.591±0.00 4.281±2.75 N/A

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