C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172122 Rbm26-004 ENSMUSG00000022119 10090 - 14:105106751-105130337 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungMuscleOvaryPlacentaENSMUST00000172122
Transcript ID Bladder Brain Liver Lung Muscle Ovary Placenta
ENSMUST00000172122 4.374±0.87 7.718±4.49 4.856±1.69 2.836±0.15 1.349±0.28 2.591±0.00 4.281±2.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EJ CIL_0002EJ_0002 CGP 14:104477534-105177327
CIL_00088S CIL_00088S_0002 VISTA 14:104534243-105135529
CIL_00083L CIL_00083L_0002 VISTA 14:105076563-105679035
CIL_0002EH CIL_0002EH_0002 CGP 14:105106751-105309298

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0006397 IEA mRNA processing
GO:0010923 ISS negative regulation of phosphatase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267229 RBM26-002 protein_coding Homo_sapiens 0 760
ENST00000438724 RBM26-201 protein_coding Homo_sapiens 0 760
ENST00000438737 RBM26-004 protein_coding Homo_sapiens 0 760
ENST00000449987 RBM26-006 protein_coding Homo_sapiens 0 983
ENST00000622611 RBM26-202 protein_coding Homo_sapiens 0 760

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