C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L19 pseudogene 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495944 RPL19P11-001 ENSG00000241668 9606 + 5:31053565-31054153 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleTestisENST00000495944
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Testis
ENST00000495944 0.085±0.00 0.186±0.00 0.065±0.00 0.118±0.00 0.028±0.00 0.032±0.00 0.062±0.00 0.054±0.00 0.167±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MJ CIL_0006MJ_0003 CGP 5:26880600-31329146
CIL_0008PA CIL_0008PA_0001 VISTA 5:30691085-31296140
CIL_0008DF CIL_0008DF_0001 VISTA 5:30694176-31295940

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017548 Rpl19-001 protein_coding Mus_musculus 0 599
ENSMUST00000121059 Rpl19-ps1-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000122422 Rpl19-ps11-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000092425 Rpl19-002 protein_coding Mus_musculus 0 590
ENSMUST00000121251 Rpl19-ps12-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000159343 Gm16238-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000121130 Gm15566-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000167150 Rpl19-ps4-201 processed_pseudogene Mus_musculus 0 457

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