Institute of Cardiovascular Regeneration Webtool Repository

Region Summary

Source ID	Type	Tax ID	Position
hs175	VISTA	9606	1:216299074-216900116
Gene	Transcript	Position	Biotype
ENSG00000042781 (USH2A) Usher syndrome 2A (autosomal recessive, mild)	ENST00000307340 (USH2A-002)	215622894-216423396	protein_coding
	ENST00000366942 (USH2A-001)	216173946-216423396	protein_coding
	ENST00000366943 (USH2A-201)	215622894-216423396	protein_coding
	ENST00000463147 (USH2A-004)	216083380-216085108	retained_intron
	ENST00000481786 (USH2A-003)	216083370-216089139	retained_intron
ENSG00000196482 (ESRRG) estrogen-related receptor gamma	ENST00000359162 (ESRRG-004)	216503254-217089605	protein_coding
	ENST00000360012 (ESRRG-005)	216503254-216805367	protein_coding
	ENST00000361395 (ESRRG-002)	216503254-216939673	protein_coding
	ENST00000361525 (ESRRG-201)	216503246-217089645	protein_coding
	ENST00000366937 (ESRRG-006)	216503254-216723453	protein_coding
	ENST00000366938 (ESRRG-007)	216503254-216939673	protein_coding
	ENST00000366940 (ESRRG-003)	216503251-217137755	protein_coding
	ENST00000391890 (ESRRG-202)	216503246-216723472	protein_coding
	ENST00000408911 (ESRRG-001)	216503254-216723453	protein_coding
	ENST00000459825 (ESRRG-020)	216865117-217089613	processed_transcript
	ENST00000459955 (ESRRG-016)	216677312-216723452	protein_coding
	ENST00000463665 (ESRRG-011)	216505454-217076931	protein_coding
	ENST00000469486 (ESRRG-017)	216677201-216723416	protein_coding
	ENST00000469913 (ESRRG-018)	216707420-216723429	processed_transcript
	ENST00000471371 (ESRRG-009)	216862230-217089636	processed_transcript
	ENST00000475275 (ESRRG-008)	216519152-216723332	protein_coding
	ENST00000477799 (ESRRG-015)	216855042-217078360	processed_transcript
	ENST00000481543 (ESRRG-019)	216677328-216723425	protein_coding
	ENST00000487276 (ESRRG-013)	216505490-216939670	protein_coding
	ENST00000488947 (ESRRG-014)	216865061-217090547	processed_transcript
	ENST00000493603 (ESRRG-010)	216503254-217137754	protein_coding
	ENST00000493748 (ESRRG-012)	216506788-217076889	protein_coding
	ENST00000586199 (ESRRG-023)	216567988-217078288	nonsense_mediated_decay
	ENST00000616180 (ESRRG-203)	216503246-216715253	protein_coding

CIL_0008DN_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
hs175	VISTA	10090	1:187818946-188419476
Gene	Transcript	Position	Biotype
ENSMUSG00000026609 (Ush2a) Usher syndrome 2A (autosomal recessive, mild)	ENSMUST00000060479 (Ush2a-001)	188263034-188965041	protein_coding
	ENSMUST00000124358 (Ush2a-002)	188262035-188452401	retained_intron
	ENSMUST00000127077 (Ush2a-005)	188953744-188964965	protein_coding
	ENSMUST00000142159 (Ush2a-004)	188537807-188678687	retained_intron
	ENSMUST00000142189 (Ush2a-003)	188262023-188357520	retained_intron
ENSMUSG00000026610 (Esrrg) estrogen-related receptor gamma	ENSMUST00000027906 (Esrrg-001)	187997827-188214885	protein_coding
	ENSMUST00000110938 (Esrrg-002)	187997868-188214884	protein_coding
	ENSMUST00000110939 (Esrrg-003)	187609029-188214386	protein_coding
	ENSMUST00000127489 (Esrrg-004)	187608791-188043502	protein_coding
	ENSMUST00000152927 (Esrrg-005)	187609696-187793742	processed_transcript

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000042781

ENST00000307340

0.002±0.00

0.010±0.00

0.023±0.00

0.027±0.00

0.020±0.02

0.036±0.03

0.008±0.00

0.055±0.05

0.004±0.00

N/A

0.009±0.01

0.002±0.00

0.220±0.18

ENST00000366942

N/A

0.021±0.00

N/A

0.013±0.00

N/A

0.002±0.00

N/A

ENST00000366943

0.002±0.00

0.010±0.00

0.011±0.00

0.023±0.00

0.027±0.00

0.020±0.02

0.037±0.03

0.008±0.00

0.055±0.05

0.004±0.00

N/A

0.009±0.01

0.002±0.00

0.044±0.00

ENST00000463147

N/A

ENST00000481786

N/A

ENSG00000196482

ENST00000359162

N/A

2.169±0.67

0.049±0.00

0.140±0.00

N/A

ENST00000360012

N/A

0.288±0.00

N/A

ENST00000361395

N/A

1.865±0.00

N/A

ENST00000361525

N/A

0.090±0.00

N/A

ENST00000366937

N/A

0.191±0.00

ENST00000366938

N/A

ENST00000366940

N/A

0.034±0.00

N/A

0.542±0.00

0.146±0.00

0.238±0.00

1.112±0.00

N/A

0.228±0.00

N/A

0.070±0.00

ENST00000391890

N/A

ENST00000408911

N/A

0.552±0.00

0.192±0.00

N/A

2.796±1.19

N/A

0.293±0.00

N/A

0.841±0.44

0.136±0.00

2.223±0.68

N/A

N/A

N/A

N/A

N/A

N/A

0.013±0.00

0.041±0.00

3.609±0.00

N/A

0.160±0.00

N/A

0.043±0.00

N/A

ENST00000475275

N/A

0.220±0.00

4.072±0.00

N/A

1.304±0.00

N/A

ENST00000477799

N/A

ENST00000481543

N/A

ENST00000487276

0.044±0.00

N/A

0.581±0.00

ENST00000488947

N/A

1.648±0.00

N/A

ENST00000493603

N/A

0.049±0.00

N/A

ENST00000493748

N/A

0.890±0.00

N/A

ENST00000586199

N/A

ENST00000616180

N/A

0.817±0.73

N/A

0.032±0.00

N/A

0.080±0.00

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000026609

ENSMUST00000060479

N/A

0.008±0.01

N/A

0.007±0.00

0.002±0.00

N/A

0.004±0.00

0.005±0.00

0.010±0.00

N/A

0.036±0.02

0.012±0.01

N/A

ENSMUST00000124358

0.005±0.00

0.017±0.00

N/A

0.005±0.00

N/A

0.040±0.01

N/A

ENSMUST00000127077

N/A

0.116±0.00

0.028±0.00

N/A

0.019±0.01

N/A

0.201±0.10

N/A

ENSMUST00000142159

N/A

0.012±0.00

N/A

0.008±0.00

N/A

0.051±0.01

N/A

ENSMUST00000142189

N/A

0.123±0.02

N/A

0.023±0.00

N/A

0.121±0.00

N/A

ENSMUSG00000026610

ENSMUST00000027906

0.132±0.00

1.097±0.55

0.044±0.00

4.166±2.47

N/A

1.363±0.26

1.752±0.00

0.087±0.07

0.361±0.04

N/A

0.030±0.00

0.088±0.00

N/A

ENSMUST00000110938

N/A

1.579±0.44

N/A

0.383±0.00

N/A

0.790±0.15

N/A

ENSMUST00000110939

0.244±0.12

1.562±0.73

0.138±0.03

4.003±1.27

0.980±0.34

1.769±0.32

6.668±0.23

11.946±1.62

0.470±0.43

0.611±0.24

1.135±0.43

0.898±0.45

0.089±0.10

0.177±0.11

ENSMUST00000127489

0.256±0.00

4.706±0.00

N/A

1.557±0.00

N/A

ENSMUST00000152927

N/A

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

Loading