C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008E0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs372 VISTA 9606 18:37298286-37899167
GeneTranscriptPositionBiotype
ENSG00000101489 (CELF4)
CUGBP, Elav-like family member 4 		ENST00000334919 (CELF4-002) 37243047-37565641 protein_coding
ENST00000361795 (CELF4-023) 37244968-37565765 protein_coding
ENST00000420428 (CELF4-201) 37243047-37566037 protein_coding
ENST00000586009 (CELF4-016) 37243047-37270920 protein_coding
ENST00000587074 (CELF4-010) 37266533-37273584 processed_transcript
ENST00000587449 (CELF4-012) 37528967-37565608 processed_transcript
ENST00000587657 (CELF4-015) 37259180-37273043 protein_coding
ENST00000587819 (CELF4-008) 37273101-37485857 protein_coding
ENST00000587911 (CELF4-017) 37245004-37264754 protein_coding
ENST00000587924 (CELF4-007) 37274865-37486034 protein_coding
ENST00000588591 (CELF4-013) 37243047-37273043 protein_coding
ENST00000588597 (CELF4-003) 37259044-37565651 protein_coding
ENST00000589229 (CELF4-009) 37273109-37485747 protein_coding
ENST00000589386 (CELF4-011) 37253855-37273043 protein_coding
ENST00000590011 (CELF4-018) 37244834-37253981 processed_transcript
ENST00000590112 (CELF4-005) 37244614-37485576 nonsense_mediated_decay
ENST00000591282 (CELF4-004) 37253811-37565641 protein_coding
ENST00000591287 (CELF4-001) 37243047-37565748 protein_coding
ENST00000591421 (CELF4-006) 37266217-37273158 retained_intron
ENST00000593271 (CELF4-014) 37253838-37273043 protein_coding
ENST00000601019 (CELF4-021) 37244968-37565748 protein_coding
ENST00000601392 (CELF4-020) 37273053-37565748 protein_coding
ENST00000603232 (CELF4-022) 37244980-37565827 protein_coding
ENSG00000279543 (RP11-1147P1.1)
 ENST00000624553 (RP11-1147P1.1-001) 37473330-37473977 TEC
ENSG00000279678 (RP11-797E24.1)
 ENST00000623010 (RP11-797E24.1-001) 37305295-37306333 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0008E0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs372 VISTA 10090 18:25491621-26092490
GeneTranscriptPositionBiotype
ENSMUSG00000024268 (Celf4)
CUGBP, Elav-like family member 4 		ENSMUST00000025117 (Celf4-201) 25477632-25753983 protein_coding
ENSMUST00000115816 (Celf4-202) 25477632-25753983 protein_coding
ENSMUSG00000084537 (Gm25845)
predicted gene, 25845 		ENSMUST00000122588 (Gm25845-201) 25598145-25598454 misc_RNA
ENSMUSG00000087121 (Gm7847)
predicted gene 7847 		ENSMUST00000151645 (Gm7847-001) 25823581-25824357 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008E0_0001ENSG00000101489ENST00000334919ENST00000361795ENST00000420428ENST00000586009ENST00000587074ENST00000587449ENST00000587657ENST00000587819ENST00000587911ENST00000587924ENST00000588591ENST00000588597ENST00000589229ENST00000589386ENST00000590011ENST00000590112ENST00000591282ENST00000591287ENST00000591421ENST00000593271ENST00000601019ENST00000601392ENST00000603232ENSG00000279543ENST00000624553ENSG00000279678ENST00000623010CIL_0008E0_0002ENSMUSG00000024268ENSMUST00000025117ENSMUST00000115816ENSMUSG00000084537ENSMUST00000122588ENSMUSG00000087121ENSMUST00000151645
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008E0_0001ENSG00000101489ENST00000334919ENST00000420428ENST00000586009ENST00000587074ENST00000587449ENST00000588591ENST00000590011ENST00000591287ENST00000591421ENST00000601392ENST00000603232ENSG00000279543ENST00000624553ENSG00000279678ENST00000623010CIL_0008E0_0002ENSMUSG00000024268ENSMUST00000025117ENSMUST00000115816ENSMUSG00000084537ENSMUST00000122588ENSMUSG00000087121ENSMUST00000151645
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101489 ENST00000334919 N/A N/A N/A 3.187±0.00 N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A
ENST00000361795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420428 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A 0.014±0.00 0.194±0.00 N/A 0.454±0.00
ENST00000586009 N/A N/A N/A N/A 0.064±0.00 0.266±0.00 N/A N/A N/A 0.033±0.00 N/A 0.037±0.03 0.131±0.00 0.978±0.00
ENST00000587074 N/A N/A N/A N/A N/A N/A N/A N/A 1.040±0.00 N/A N/A N/A N/A N/A
ENST00000587449 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588591 N/A N/A N/A 2.180±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590011 0.148±0.00 N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A 0.283±0.00 N/A N/A N/A N/A
ENST00000590112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591287 N/A N/A N/A 5.103±2.14 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591421 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.221±0.00 N/A N/A N/A N/A
ENST00000593271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601392 N/A N/A N/A N/A N/A 0.891±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603232 N/A N/A N/A 23.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279543 ENST00000624553 N/A N/A N/A 0.160±0.13 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279678 ENST00000623010 N/A N/A N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024268 ENSMUST00000025117 0.337±0.05 2.943±1.56 0.378±0.00 66.205±17.34 0.542±0.26 1.987±0.64 0.127±0.05 0.127±0.04 0.104±0.09 0.179±0.13 0.034±0.02 0.617±0.41 0.276±0.30 0.631±0.25
ENSMUST00000115816 N/A 1.297±0.36 0.170±0.07 15.494±0.43 0.296±0.04 0.556±0.11 N/A 0.090±0.03 0.061±0.05 0.132±0.05 N/A 0.189±0.07 N/A 0.389±0.18
ENSMUSG00000084537 ENSMUST00000122588 N/A N/A 0.056±0.00 1.906±1.65 N/A N/A N/A N/A 0.205±0.14 0.368±0.15 N/A N/A 0.348±0.22 N/A
ENSMUSG00000087121 ENSMUST00000151645 0.049±0.00 0.107±0.00 0.006±0.00 0.079±0.04 N/A 0.095±0.00 N/A 0.049±0.00 0.065±0.06 N/A N/A 0.081±0.00 0.073±0.00 0.043±0.00

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