C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7847
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151645 Gm7847-001 ENSMUSG00000087121 10090 - 18:25823581-25824357 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000151645
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000151645 0.049±0.00 0.107±0.00 0.006±0.00 0.079±0.04 0.095±0.00 0.049±0.00 0.065±0.06 0.081±0.00 0.073±0.00 0.043±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E3 CIL_0008E3_0002 VISTA 18:25377414-25978414
CIL_0003VI CIL_0003VI_0002 CGP 18:25477632-30348126
CIL_0008E0 CIL_0008E0_0002 VISTA 18:25491621-26092490
CIL_0007OQ CIL_0007OQ_0003 UCNEbase 18:25791971-26197317

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000004238 rpl7a-001 protein_coding Danio_rerio 0 473
ENSDART00000137988 rpl7a-002 retained_intron Danio_rerio 0 368
ENSDART00000132525 rpl7a-003 retained_intron Danio_rerio 0 326
ENSDART00000137409 rpl7a-004 retained_intron Danio_rerio 0 303
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 0 191
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 817
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 590
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 689
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 575
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 689
ENST00000424041 RPL7AP14-001 processed_pseudogene Homo_sapiens 0 669
ENST00000426573 RP4-738P11.4-001 processed_pseudogene Homo_sapiens 0 381
ENST00000426651 RPL7A-004 protein_coding Homo_sapiens 0 531
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 695
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 676
ENST00000429766 AC073900.4-001 processed_pseudogene Homo_sapiens 0 475
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 689
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 689
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 601
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 689
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 553
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 689
ENST00000446956 RPL7AP15-001 processed_pseudogene Homo_sapiens 0 534
ENST00000449688 RP4-738P11.3-001 processed_pseudogene Homo_sapiens 0 316
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 689
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 702
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 601
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 689
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 534
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 813
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 728
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 645
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 660
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 789
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 758
ENST00000485706 RPL7A-006 processed_transcript Homo_sapiens 0 462
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 584
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 721
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 616
ENST00000496554 RPL7A-002 processed_transcript Homo_sapiens 0 566
ENST00000496790 FAM185A-005 processed_transcript Homo_sapiens 0 231
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 717
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 569
ENST00000557949 RP11-356M20.1-001 processed_pseudogene Homo_sapiens 0 486
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 778

Loading