C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008HW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2049 VISTA 9606 6:15208612-15811107
GeneTranscriptPositionBiotype
ENSG00000008083 (JARID2)
jumonji, AT rich interactive domain 2 		ENST00000341776 (JARID2-001) 15246296-15522021 protein_coding
ENST00000397311 (JARID2-201) 15248855-15522040 protein_coding
ENST00000474854 (JARID2-002) 15501358-15508393 processed_transcript
ENSG00000047579 (DTNBP1)
dystrobrevin binding protein 1 		ENST00000338950 (DTNBP1-002) 15523563-15662975 protein_coding
ENST00000344537 (DTNBP1-001) 15522801-15663042 protein_coding
ENST00000355917 (DTNBP1-201) 15522810-15663058 protein_coding
ENST00000462989 (DTNBP1-003) 15522807-15586015 protein_coding
ENST00000506844 (DTNBP1-005) 15523985-15662920 nonsense_mediated_decay
ENST00000509674 (DTNBP1-010) 15523055-15548362 protein_coding
ENST00000510395 (DTNBP1-007) 15522810-15663007 nonsense_mediated_decay
ENST00000511762 (DTNBP1-008) 15524540-15663020 protein_coding
ENST00000513680 (DTNBP1-004) 15522843-15663058 nonsense_mediated_decay
ENST00000514651 (DTNBP1-009) 15524112-15533547 retained_intron
ENST00000515875 (DTNBP1-006) 15522837-15663030 nonsense_mediated_decay
ENST00000622898 (DTNBP1-202) 15522810-15663058 protein_coding
ENSG00000235488 (JARID2-AS1)
JARID2 antisense RNA 1 		ENST00000441978 (JARID2-AS1-001) 15247815-15248634 antisense
ENSG00000271888 (RP11-560J1.2)
 ENST00000607711 (RP11-560J1.2-001) 15243923-15245000 lincRNA
ENSG00000277411 (5S_rRNA)
5S ribosomal RNA 		ENST00000614916 (5S_rRNA.1-234) 15522195-15522300 rRNA
CIL_0008HW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2049 VISTA 10090 13:44611410-45213085
GeneTranscriptPositionBiotype
ENSMUSG00000038518 (Jarid2)
jumonji, AT rich interactive domain 2 		ENSMUST00000044608 (Jarid2-002) 44730823-44920995 protein_coding
ENSMUST00000172581 (Jarid2-012) 44734040-44874314 processed_transcript
ENSMUST00000172708 (Jarid2-016) 44730859-44874351 processed_transcript
ENSMUST00000172830 (Jarid2-015) 44729795-44823510 protein_coding
ENSMUST00000172924 (Jarid2-010) 44731859-44874342 processed_transcript
ENSMUST00000172977 (Jarid2-014) 44731598-44884748 nonsense_mediated_decay
ENSMUST00000173003 (Jarid2-008) 44840783-44896481 nonsense_mediated_decay
ENSMUST00000173246 (Jarid2-001) 44731271-44921643 protein_coding
ENSMUST00000173367 (Jarid2-007) 44730838-44903258 protein_coding
ENSMUST00000173704 (Jarid2-003) 44730774-44920108 protein_coding
ENSMUST00000173906 (Jarid2-006) 44840691-44914319 protein_coding
ENSMUST00000174068 (Jarid2-011) 44729535-44848340 protein_coding
ENSMUST00000174086 (Jarid2-013) 44731287-44823403 protein_coding
ENSMUST00000174394 (Jarid2-009) 44729474-44731574 processed_transcript
ENSMUST00000174557 (Jarid2-004) 44731368-44885028 retained_intron
ENSMUST00000174683 (Jarid2-005) 44731370-44921640 retained_intron
ENSMUSG00000047061 (Gm9817)
predicted gene 9817 		ENSMUST00000054395 (Gm9817-201) 45078692-45081222 protein_coding
ENSMUSG00000057531 (Dtnbp1)
dystrobrevin binding protein 1 		ENSMUST00000072329 (Dtnbp1-201) 44922079-45002096 protein_coding
ENSMUST00000110128 (Dtnbp1-202) 44922085-45002096 protein_coding
ENSMUSG00000078915 (Hsp25-ps1)
heat shock protein 25, pseudogene 1 		ENSMUST00000109187 (Hsp25-ps1-201) 45078498-45079127 pseudogene
ENSMUSG00000098136 (Gm8513)
predicted gene 8513 		ENSMUST00000182830 (Gm8513-001) 45186534-45187536 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008HW_0001ENSG00000008083ENST00000341776ENST00000397311ENST00000474854ENSG00000047579ENST00000338950ENST00000344537ENST00000355917ENST00000462989ENST00000506844ENST00000509674ENST00000510395ENST00000511762ENST00000513680ENST00000514651ENST00000515875ENST00000622898ENSG00000235488ENST00000441978ENSG00000271888ENST00000607711ENSG00000277411ENST00000614916CIL_0008HW_0002ENSMUSG00000038518ENSMUST00000044608ENSMUST00000172581ENSMUST00000172708ENSMUST00000172830ENSMUST00000172924ENSMUST00000172977ENSMUST00000173003ENSMUST00000173246ENSMUST00000173367ENSMUST00000173704ENSMUST00000173906ENSMUST00000174068ENSMUST00000174086ENSMUST00000174394ENSMUST00000174557ENSMUST00000174683ENSMUSG00000047061ENSMUST00000054395ENSMUSG00000057531ENSMUST00000072329ENSMUST00000110128ENSMUSG00000078915ENSMUST00000109187ENSMUSG00000098136ENSMUST00000182830
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008HW_0001ENSG00000008083ENST00000341776ENST00000397311ENSG00000047579ENST00000338950ENST00000344537ENST00000355917ENST00000462989ENST00000506844ENST00000509674ENST00000510395ENST00000511762ENST00000514651ENST00000515875ENST00000622898ENSG00000235488ENST00000441978ENSG00000271888ENST00000607711ENSG00000277411ENST00000614916CIL_0008HW_0002ENSMUSG00000038518ENSMUST00000044608ENSMUST00000172581ENSMUST00000173246ENSMUST00000173367ENSMUST00000173704ENSMUST00000173906ENSMUST00000174683ENSMUSG00000047061ENSMUST00000054395ENSMUSG00000057531ENSMUST00000072329ENSMUSG00000078915ENSMUST00000109187ENSMUSG00000098136ENSMUST00000182830
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008083 ENST00000341776 1.322±0.00 0.857±0.00 0.270±0.00 2.108±1.39 1.935±0.37 1.881±0.00 1.078±0.40 0.286±0.00 1.074±0.90 2.139±0.00 1.173±0.00 1.169±0.58 2.805±1.12 4.683±1.33
ENST00000397311 1.252±0.00 1.742±0.00 N/A 0.667±0.12 0.725±0.00 1.441±0.00 N/A 1.653±0.00 0.925±0.00 1.351±0.00 1.421±0.00 1.051±0.50 0.831±0.30 7.332±4.54
ENST00000474854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000047579 ENST00000338950 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.333±0.00 N/A N/A N/A N/A
ENST00000344537 6.787±0.00 8.326±0.00 N/A 10.171±0.00 5.584±0.00 12.171±0.00 6.363±0.00 5.819±0.00 0.808±0.00 4.742±0.00 3.985±0.00 11.591±11.24 11.288±3.70 8.609±0.66
ENST00000355917 N/A N/A N/A N/A 0.488±0.00 1.808±0.00 N/A N/A N/A 2.611±2.08 N/A 4.574±0.00 5.604±0.00 N/A
ENST00000462989 N/A N/A N/A 6.423±0.00 1.160±0.00 N/A N/A N/A N/A N/A N/A 1.372±0.00 N/A N/A
ENST00000506844 N/A N/A N/A N/A N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A N/A N/A
ENST00000509674 N/A 11.242±0.00 N/A N/A N/A 8.508±0.00 N/A 0.272±0.00 1.419±0.00 8.852±0.00 N/A N/A N/A N/A
ENST00000510395 1.882±0.00 N/A 0.399±0.00 N/A N/A N/A 0.052±0.00 N/A 0.207±0.00 N/A N/A N/A N/A 2.924±0.00
ENST00000511762 N/A N/A N/A 1.555±0.00 6.606±0.00 5.498±0.00 0.235±0.00 0.042±0.00 N/A N/A 1.725±0.00 3.282±1.81 9.191±0.00 N/A
ENST00000513680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514651 N/A N/A 0.784±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.254±1.86 N/A N/A N/A
ENST00000622898 4.226±0.00 8.832±0.00 N/A 8.323±0.00 0.584±0.00 N/A 2.297±2.01 5.488±0.00 1.282±0.77 N/A 15.094±0.00 N/A 2.538±0.00 4.795±0.00
ENSG00000235488 ENST00000441978 0.452±0.00 0.395±0.00 2.050±0.00 0.096±0.00 0.174±0.00 N/A 0.175±0.03 N/A 0.659±0.00 N/A 0.070±0.00 0.895±0.71 1.161±0.91 10.068±3.67
ENSG00000271888 ENST00000607711 0.384±0.00 0.122±0.00 N/A 0.173±0.00 0.246±0.00 N/A 0.086±0.00 0.108±0.02 0.032±0.00 0.097±0.00 0.016±0.00 0.330±0.09 0.168±0.07 0.414±0.09
ENSG00000277411 ENST00000614916 0.245±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.318±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038518 ENSMUST00000044608 N/A 0.452±0.00 N/A 2.740±0.53 1.431±0.00 1.914±0.00 N/A N/A 1.483±0.42 1.085±0.00 N/A 3.298±1.40 3.060±0.31 1.480±0.26
ENSMUST00000172581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 55.795±0.00 42.426±0.00
ENSMUST00000172708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173246 3.701±0.64 1.171±0.51 7.352±0.18 10.020±0.78 2.773±0.65 2.451±0.81 1.689±0.59 3.487±1.43 2.458±1.86 2.552±0.72 3.318±0.60 3.114±1.74 6.734±0.51 1.545±0.71
ENSMUST00000173367 N/A 1.450±0.23 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173704 3.209±1.12 0.741±0.00 N/A 1.854±0.00 2.274±0.75 2.177±1.13 1.158±0.29 1.917±0.60 0.970±0.63 0.802±0.12 1.761±0.00 4.208±1.27 5.870±1.90 4.806±1.30
ENSMUST00000173906 2.203±0.00 2.753±0.51 N/A N/A 2.731±0.16 2.261±0.66 N/A 1.971±0.00 0.377±0.05 1.272±0.00 N/A 2.697±0.72 N/A 2.263±0.00
ENSMUST00000174068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174683 0.618±0.03 N/A N/A 1.211±0.50 0.843±0.02 0.899±0.20 0.326±0.02 0.519±0.03 N/A 0.509±0.12 N/A 1.004±0.18 N/A N/A
ENSMUSG00000047061 ENSMUST00000054395 1.302±0.38 1.438±1.39 5.308±4.84 0.109±0.06 2.968±1.30 3.184±1.16 0.989±0.47 0.194±0.20 0.033±0.03 2.904±0.58 N/A 3.177±2.18 0.166±0.13 0.272±0.13
ENSMUSG00000057531 ENSMUST00000072329 46.711±14.21 19.552±1.63 30.551±4.07 30.681±16.04 46.314±9.62 12.914±2.77 50.324±1.83 59.620±4.01 19.606±5.27 25.995±2.47 16.861±1.70 25.673±5.08 28.151±7.56 28.531±2.24
ENSMUST00000110128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078915 ENSMUST00000109187 1.137±0.00 0.510±0.04 2.554±0.06 0.139±0.11 0.581±0.00 0.766±0.16 1.435±0.81 0.211±0.09 0.040±0.02 N/A 0.283±0.10 0.754±0.12 2.607±0.77 0.866±0.44
ENSMUSG00000098136 ENSMUST00000182830 N/A N/A 0.008±0.00 0.022±0.01 0.073±0.00 N/A N/A N/A N/A N/A N/A 0.035±0.00 0.010±0.00 0.034±0.00

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