C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8513
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182830 Gm8513-001 ENSMUSG00000098136 10090 - 13:45186534-45187536 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastOvaryPlacentaTestisENSMUST00000182830
Transcript ID Bladder Brain Breast Ovary Placenta Testis
ENSMUST00000182830 0.008±0.00 0.022±0.01 0.073±0.00 0.035±0.00 0.010±0.00 0.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HW CIL_0008HW_0002 VISTA 13:44611410-45213085

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 254
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 918
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 749
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 898
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 918
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 918
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 651
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 734
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 643
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 808
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 763
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 665
ENST00000435908 GAPDHP59-001 processed_pseudogene Homo_sapiens 0 255
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 597
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 606
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 861
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 651
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 545
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 749
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 749
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 412
ENST00000489113 GAPDHP47-001 processed_pseudogene Homo_sapiens 0 479
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 669
ENST00000509132 GAPDHP66-001 processed_pseudogene Homo_sapiens 0 525
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 255
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 760
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 726
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 846

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