C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008KE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs561 VISTA 9606 12:16416099-17018481
GeneTranscriptPositionBiotype
ENSG00000008394 (MGST1)
microsomal glutathione S-transferase 1 		ENST00000010404 (MGST1-201) 16347142-16364409 protein_coding
ENST00000359720 (MGST1-016) 16382827-16438761 processed_transcript
ENST00000396207 (MGST1-002) 16353417-16364409 protein_coding
ENST00000396209 (MGST1-202) 16347778-16364409 protein_coding
ENST00000396210 (MGST1-001) 16347649-16364403 protein_coding
ENST00000534835 (MGST1-008) 16347645-16349106 processed_transcript
ENST00000535309 (MGST1-004) 16347694-16377192 protein_coding
ENST00000535624 (MGST1-011) 16357511-16364260 retained_intron
ENST00000536371 (MGST1-005) 16347142-16363806 protein_coding
ENST00000537878 (MGST1-012) 16347654-16354724 retained_intron
ENST00000538857 (MGST1-015) 16354231-16589580 processed_transcript
ENST00000538885 (MGST1-009) 16350746-16354378 protein_coding
ENST00000539036 (MGST1-017) 16347652-16609259 processed_transcript
ENST00000539708 (MGST1-010) 16347664-16364060 processed_transcript
ENST00000540056 (MGST1-007) 16347778-16364071 protein_coding
ENST00000540126 (MGST1-006) 16347797-16363814 protein_coding
ENST00000542256 (MGST1-003) 16347654-16370408 processed_transcript
ENST00000543076 (MGST1-013) 16347645-16363999 protein_coding
ENST00000624056 (MGST1-014) 16362568-16364409 TEC
ENSG00000213235 (EEF1A1P16)
eukaryotic translation elongation factor 1 alpha 1 pseudogene 16 		ENST00000325349 (EEF1A1P16-001) 16990670-16992083 processed_pseudogene
ENSG00000255871 (RP11-69C13.1)
 ENST00000418574 (RP11-69C13.1-001) 16693800-16695977 lincRNA
ENSG00000256211 (RP11-1018J11.1)
 ENST00000444513 (RP11-1018J11.1-001) 16989126-16989936 processed_pseudogene
ENSG00000256450 (RP11-424M22.1)
 ENST00000540992 (RP11-424M22.1-001) 16513445-16514371 processed_pseudogene
ENSG00000256564 (RP11-424M22.3)
 ENST00000541892 (RP11-424M22.3-001) 16567411-16573940 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0008KE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs561 VISTA 10090 6:138213754-138816103
GeneTranscriptPositionBiotype
ENSMUSG00000030226 (Lmo3)
LIM domain only 3 		ENSMUST00000067437 (Lmo3-006) 138364439-138422831 nonsense_mediated_decay
ENSMUST00000160050 (Lmo3-008) 138364962-138424615 nonsense_mediated_decay
ENSMUST00000161450 (Lmo3-007) 138365595-138422917 protein_coding
ENSMUST00000162185 (Lmo3-005) 138377208-138422999 protein_coding
ENSMUST00000162772 (Lmo3-001) 138362918-138581968 protein_coding
ENSMUST00000162932 (Lmo3-003) 138416415-138426816 protein_coding
ENSMUST00000163024 (Lmo3-002) 138365591-138422974 protein_coding
ENSMUST00000163065 (Lmo3-004) 138364196-138421452 protein_coding
ENSMUSG00000046717 (Igbp1b)
immunoglobulin (CD79A) binding protein 1b 		ENSMUST00000054786 (Igbp1b-201) 138657095-138658444 protein_coding
ENSMUSG00000089957 (A830011K09Rik)
RIKEN cDNA A830011K09 gene 		ENSMUST00000159822 (A830011K09Rik-001) 138423105-138428971 antisense
ENSMUST00000162868 (A830011K09Rik-002) 138423271-138429592 antisense
ENSMUSG00000100166 (RP24-96N20.1)
RIKEN cDNA B230110G15 gene 		ENSMUST00000190868 (RP24-96N20.1-001) 138580624-138599314 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008KE_0001ENSG00000008394ENST00000010404ENST00000359720ENST00000396207ENST00000396209ENST00000396210ENST00000534835ENST00000535309ENST00000535624ENST00000536371ENST00000537878ENST00000538857ENST00000538885ENST00000539036ENST00000539708ENST00000540056ENST00000540126ENST00000542256ENST00000543076ENST00000624056ENSG00000213235ENST00000325349ENSG00000255871ENST00000418574ENSG00000256211ENST00000444513ENSG00000256450ENST00000540992ENSG00000256564ENST00000541892CIL_0008KE_0002ENSMUSG00000030226ENSMUST00000067437ENSMUST00000160050ENSMUST00000161450ENSMUST00000162185ENSMUST00000162772ENSMUST00000162932ENSMUST00000163024ENSMUST00000163065ENSMUSG00000046717ENSMUST00000054786ENSMUSG00000089957ENSMUST00000159822ENSMUST00000162868ENSMUSG00000100166ENSMUST00000190868
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008KE_0001ENSG00000008394ENST00000010404ENST00000396207ENST00000396209ENST00000396210ENST00000535624ENST00000538857ENST00000539036ENST00000543076ENST00000624056ENSG00000213235ENST00000325349ENSG00000255871ENST00000418574ENSG00000256211ENST00000444513ENSG00000256450ENST00000540992ENSG00000256564ENST00000541892CIL_0008KE_0002ENSMUSG00000030226ENSMUST00000067437ENSMUST00000160050ENSMUST00000161450ENSMUST00000162185ENSMUST00000162772ENSMUST00000162932ENSMUST00000163024ENSMUST00000163065ENSMUSG00000046717ENSMUST00000054786ENSMUSG00000089957ENSMUST00000159822ENSMUST00000162868ENSMUSG00000100166ENSMUST00000190868
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008394 ENST00000010404 N/A N/A N/A N/A 10.515±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.407±0.00
ENST00000359720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396207 N/A 2.222±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396209 N/A N/A 1.535±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396210 205.998±0.00 8.911±0.00 3.465±0.00 13.276±4.92 205.840±199.13 43.923±10.95 7.756±5.04 114.742±31.91 195.214±174.11 50.162±0.00 8.301±0.00 32.178±23.38 12.098±2.97 7.436±5.50
ENST00000534835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535624 N/A N/A 5.795±0.00 N/A N/A 13.187±0.00 3.102±2.11 44.935±0.00 150.685±0.00 N/A 3.189±0.64 86.807±0.00 13.195±0.00 3.534±0.00
ENST00000536371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.422±0.00
ENST00000538885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.242±0.00 N/A N/A N/A
ENST00000539708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543076 239.702±0.00 14.639±0.00 N/A 28.235±0.00 574.618±0.00 74.448±0.00 N/A N/A N/A N/A N/A 153.007±0.00 24.684±0.00 4.699±0.00
ENST00000624056 N/A N/A 0.528±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213235 ENST00000325349 0.444±0.00 0.534±0.00 N/A 0.169±0.00 0.395±0.00 0.428±0.00 0.033±0.00 0.309±0.00 0.095±0.00 0.582±0.00 0.210±0.00 0.104±0.09 N/A 0.206±0.05
ENSG00000255871 ENST00000418574 0.042±0.00 0.022±0.00 N/A 0.018±0.00 0.065±0.04 0.103±0.03 0.025±0.00 N/A 0.011±0.00 N/A 0.024±0.00 0.028±0.00 0.004±0.00 0.027±0.02
ENSG00000256211 ENST00000444513 N/A N/A N/A 0.022±0.00 0.022±0.00 0.020±0.00 0.060±0.00 0.044±0.00 N/A N/A 0.059±0.00 N/A 0.158±0.00 0.028±0.01
ENSG00000256450 ENST00000540992 N/A N/A 0.190±0.00 0.172±0.00 0.057±0.00 0.706±0.00 0.033±0.00 N/A 0.120±0.00 0.828±0.00 N/A 0.363±0.46 N/A N/A
ENSG00000256564 ENST00000541892 0.484±0.00 0.108±0.00 N/A 0.200±0.00 0.369±0.23 N/A 0.153±0.02 N/A 0.025±0.00 0.186±0.00 N/A 0.109±0.00 N/A 0.422±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030226 ENSMUST00000067437 0.061±0.00 0.070±0.00 N/A 8.406±0.00 N/A N/A 0.016±0.00 0.023±0.00 0.018±0.01 N/A N/A 0.079±0.07 N/A 0.022±0.00
ENSMUST00000160050 N/A 0.123±0.00 N/A N/A N/A N/A 0.022±0.00 N/A 0.014±0.00 N/A N/A 0.224±0.02 0.011±0.00 N/A
ENSMUST00000161450 0.037±0.00 0.280±0.00 0.115±0.00 29.445±0.00 N/A 0.222±0.10 N/A 0.035±0.00 0.007±0.00 N/A 0.016±0.00 0.117±0.06 N/A 0.077±0.00
ENSMUST00000162185 0.084±0.00 0.146±0.07 N/A N/A 0.156±0.00 N/A N/A N/A 0.037±0.04 0.109±0.04 N/A 0.435±0.25 N/A N/A
ENSMUST00000162772 0.018±0.01 N/A 0.028±0.00 11.199±6.13 N/A 0.182±0.06 0.023±0.00 0.033±0.00 0.011±0.01 N/A 0.011±0.00 0.085±0.05 0.003±0.00 0.035±0.00
ENSMUST00000162932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.07 N/A N/A
ENSMUST00000163024 0.122±0.00 0.170±0.10 0.167±0.02 15.903±0.00 N/A 0.347±0.00 N/A N/A 0.029±0.00 N/A N/A 0.204±0.00 N/A N/A
ENSMUST00000163065 N/A N/A 0.154±0.04 10.425±0.44 N/A 0.158±0.00 0.022±0.01 0.035±0.00 0.009±0.00 N/A 0.014±0.00 0.073±0.05 0.012±0.00 0.011±0.00
ENSMUSG00000046717 ENSMUST00000054786 N/A N/A N/A 0.119±0.07 N/A N/A 0.026±0.00 0.024±0.00 N/A N/A N/A N/A 0.024±0.01 15.982±1.65
ENSMUSG00000089957 ENSMUST00000159822 0.031±0.01 N/A 0.048±0.00 0.842±0.15 N/A N/A N/A N/A N/A N/A 0.027±0.00 0.094±0.05 0.003±0.00 N/A
ENSMUST00000162868 0.067±0.00 N/A 0.004±0.00 0.195±0.00 N/A N/A N/A N/A 0.012±0.00 N/A N/A 0.007±0.00 0.005±0.00 0.006±0.00
ENSMUSG00000100166 ENSMUST00000190868 N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A

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