C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008LJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1738 VISTA 9606 6:100995648-101597358
GeneTranscriptPositionBiotype
ENSG00000164418 (GRIK2)
glutamate receptor, ionotropic, kainate 2 		ENST00000318991 (GRIK2-201) 101621948-102070083 protein_coding
ENST00000358361 (GRIK2-008) 101398793-101745143 protein_coding
ENST00000369134 (GRIK2-202) 101621948-102070083 protein_coding
ENST00000369137 (GRIK2-203) 101621948-102070083 protein_coding
ENST00000369138 (GRIK2-003) 101398788-102070083 protein_coding
ENST00000413795 (GRIK2-002) 101398788-102070083 protein_coding
ENST00000421544 (GRIK2-001) 101398788-102070083 protein_coding
ENST00000436862 (GRIK2-005) 101818370-101890384 protein_coding
ENST00000455610 (GRIK2-004) 101676769-101859370 protein_coding
ENST00000487161 (GRIK2-006) 101928143-102035541 retained_intron
ENST00000487395 (GRIK2-007) 101927779-101993842 retained_intron
ENSG00000218475 (RP11-93K7.1)
 ENST00000401561 (RP11-93K7.1-001) 101430411-101431553 processed_pseudogene
CIL_0008LJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1738 VISTA 10090 10:49684349-50285953
GeneTranscriptPositionBiotype
ENSMUSG00000056073 (Grik2)
glutamate receptor, ionotropic, kainate 2 (beta 2) 		ENSMUST00000079751 (Grik2-201) 49105018-49783259 protein_coding
ENSMUST00000105483 (Grik2-002) 49495438-49788754 protein_coding
ENSMUST00000105484 (Grik2-202) 49099843-49783259 protein_coding
ENSMUST00000105485 (Grik2-004) 49100989-49783409 protein_coding
ENSMUST00000105486 (Grik2-005) 49100727-49783259 protein_coding
ENSMUST00000105487 (Grik2-001) 49099460-49788766 protein_coding
ENSMUST00000129279 (Grik2-006) 49101128-49103931 retained_intron
ENSMUST00000147808 (Grik2-003) 49099843-49243036 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008LJ_0001ENSG00000164418ENST00000318991ENST00000358361ENST00000369134ENST00000369137ENST00000369138ENST00000413795ENST00000421544ENST00000436862ENST00000455610ENST00000487161ENST00000487395ENSG00000218475ENST00000401561CIL_0008LJ_0002ENSMUSG00000056073ENSMUST00000079751ENSMUST00000105483ENSMUST00000105484ENSMUST00000105485ENSMUST00000105486ENSMUST00000105487ENSMUST00000129279ENSMUST00000147808
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008LJ_0001ENSG00000164418ENST00000318991ENST00000358361ENST00000369134ENST00000369137ENST00000369138ENST00000413795ENST00000421544ENST00000436862ENST00000455610ENST00000487161ENSG00000218475ENST00000401561CIL_0008LJ_0002ENSMUSG00000056073ENSMUST00000079751ENSMUST00000105483ENSMUST00000105484ENSMUST00000105485ENSMUST00000105486ENSMUST00000105487ENSMUST00000129279ENSMUST00000147808
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164418 ENST00000318991 0.045±0.00 N/A N/A N/A 0.205±0.00 0.143±0.00 0.374±0.00 0.232±0.00 0.157±0.00 0.056±0.00 N/A 0.172±0.00 N/A 0.085±0.00
ENST00000358361 0.031±0.00 0.111±0.00 N/A N/A 0.087±0.03 N/A 0.205±0.00 0.309±0.00 0.060±0.00 0.444±0.31 N/A 0.098±0.00 N/A 0.202±0.00
ENST00000369134 N/A N/A 0.183±0.00 2.642±2.00 N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A 0.073±0.00 N/A
ENST00000369137 N/A N/A N/A N/A N/A 0.175±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000369138 N/A N/A N/A N/A N/A N/A 0.744±0.59 N/A N/A 0.067±0.00 N/A 0.168±0.07 0.219±0.08 0.545±0.00
ENST00000413795 N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421544 N/A N/A N/A 2.457±0.00 0.011±0.00 0.210±0.00 N/A N/A N/A N/A N/A N/A 0.372±0.08 N/A
ENST00000436862 N/A N/A N/A N/A N/A 0.801±0.00 N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A
ENST00000455610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.769±0.00 N/A N/A N/A
ENST00000487161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.596±0.00 N/A N/A
ENST00000487395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000218475 ENST00000401561 N/A N/A N/A 0.385±0.00 N/A N/A 0.112±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000056073 ENSMUST00000079751 0.770±0.03 0.556±0.23 N/A 6.539±0.00 0.076±0.04 0.083±0.00 0.111±0.03 0.061±0.03 0.018±0.01 0.203±0.07 N/A 0.259±0.16 0.013±0.00 1.157±0.78
ENSMUST00000105483 0.206±0.00 0.309±0.27 N/A N/A 0.081±0.07 0.092±0.01 0.118±0.02 0.067±0.02 N/A 0.089±0.04 0.010±0.00 0.164±0.10 N/A N/A
ENSMUST00000105484 N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A 0.024±0.02 N/A 0.028±0.02 0.045±0.00 N/A N/A
ENSMUST00000105485 N/A N/A N/A 1.750±0.00 0.016±0.00 0.152±0.00 N/A 0.023±0.00 N/A N/A 0.040±0.00 0.044±0.00 0.026±0.01 0.071±0.00
ENSMUST00000105486 N/A N/A 0.090±0.00 N/A N/A N/A N/A N/A 0.007±0.00 0.063±0.00 N/A N/A N/A 0.237±0.13
ENSMUST00000105487 0.015±0.00 0.240±0.15 0.050±0.00 8.180±0.31 0.084±0.01 0.160±0.00 0.052±0.02 0.046±0.00 0.030±0.02 0.117±0.08 0.018±0.00 0.094±0.04 0.007±0.00 N/A
ENSMUST00000129279 N/A N/A N/A N/A N/A N/A 0.304±0.00 N/A N/A N/A N/A 1.440±0.00 N/A N/A
ENSMUST00000147808 N/A 0.319±0.08 N/A 5.376±2.67 0.032±0.00 0.040±0.00 N/A 0.010±0.00 0.006±0.00 N/A 0.012±0.00 0.074±0.02 0.011±0.00 N/A

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