C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, kainate 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318991 GRIK2-201 ENSG00000164418 9606 + 6:101621948-102070083 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungOvaryTestisENST00000318991
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000318991 0.045±0.00 0.205±0.00 0.143±0.00 0.374±0.00 0.232±0.00 0.157±0.00 0.056±0.00 0.172±0.00 0.085±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LJ CIL_0008LJ_0001 VISTA 6:100995648-101597358

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0005234 IEA extracellular-glutamate-gated ion channel activity
GO:0016020 IEA membrane
GO:0034220 IEA ion transmembrane transport
GO:0035235 IEA ionotropic glutamate receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105486 Grik2-005 protein_coding Mus_musculus 0 4377
ENSMUST00000105484 Grik2-202 protein_coding Mus_musculus 0 3494
ENSMUST00000105487 Grik2-001 protein_coding Mus_musculus 0 3494
ENSMUST00000079751 Grik2-201 protein_coding Mus_musculus 0 3491
ENSMUST00000105485 Grik2-004 protein_coding Mus_musculus 0 3491
ENSMUST00000114137 Grik1-203 protein_coding Mus_musculus 0 1216
ENSMUST00000023652 Grik1-201 protein_coding Mus_musculus 0 1216
ENSMUST00000072256 Grik1-202 protein_coding Mus_musculus 0 1216
ENSMUST00000105483 Grik2-002 protein_coding Mus_musculus 0 1109
ENSMUST00000147808 Grik2-003 retained_intron Mus_musculus 0 1009
ENSMUST00000129279 Grik2-006 retained_intron Mus_musculus 0 377

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