C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tropomyosin 4a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000009054 tpm4a-201 ENSDARG00000023963 7955 - 22:15727178-15748689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000009054
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000009054 9.312±0.00 8073.670±699.70 15.504±0.00 6.979±0.00 9.479±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029549 Tpm3-003 protein_coding Mus_musculus 0 267
ENSMUST00000062193 Tpm3-201 protein_coding Mus_musculus 0 387
ENSMUST00000072359 Tpm3-rs7-201 protein_coding Mus_musculus 0 267
ENSMUST00000116350 Tpm3-rs2-001 processed_pseudogene Mus_musculus 2e-26 124
ENSMUST00000118566 Tpm3-004 protein_coding Mus_musculus 0 411
ENSMUST00000119158 Tpm3-005 protein_coding Mus_musculus 0 355
ENSMUST00000119570 Tpm3-001 protein_coding Mus_musculus 0 387
ENSMUST00000121503 Tpm3-002 protein_coding Mus_musculus 0 531
ENSMUST00000143281 Tpm3-015 retained_intron Mus_musculus 2e-28 130
ENSMUST00000149734 Tpm3-014 retained_intron Mus_musculus 2e-21 106
ENST00000300933 TPM4-002 protein_coding Homo_sapiens 0 414
ENST00000344824 TPM4-001 protein_coding Homo_sapiens 0 606
ENST00000520239 GS1-44D20.1-001 processed_pseudogene Homo_sapiens 0 326
ENST00000586499 TPM4-008 protein_coding Homo_sapiens 0 368
ENST00000586833 TPM4-009 protein_coding Homo_sapiens 0 379
ENST00000587201 TPM4-011 retained_intron Homo_sapiens 0 294
ENST00000588410 TPM4-012 protein_coding Homo_sapiens 0 294
ENST00000588483 TPM4-014 protein_coding Homo_sapiens 9.99967e-42 174
ENST00000588507 TPM4-010 protein_coding Homo_sapiens 0 217
ENST00000592138 TPM4-015 protein_coding Homo_sapiens 0 337

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