C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Uncharacterized protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000009653 KCNA1A-201 ENSDARG00000017108 7955 + 4:59971886-59973367 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleENSDART00000009653
Transcript ID Brain Kidney Muscle
ENSDART00000009653 5.201±0.00 0.097±0.00 0.260±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BY CIL_0006BY_0001 CGP 4:59850835-59973367

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005515 IEA protein binding
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040751 Kcna6-001 nonsense_mediated_decay Mus_musculus 5e-18 99
ENSMUST00000052718 Kcna3-201 protein_coding Mus_musculus 0 243
ENSMUST00000112242 Kcna6-003 protein_coding Mus_musculus 3e-18 99
ENSMUST00000185333 Kcna6-201 protein_coding Mus_musculus 5e-18 99
ENST00000369769 KCNA3-001 protein_coding Homo_sapiens 0 231
ENST00000382545 KCNA1-001 protein_coding Homo_sapiens 0 773

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