C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, shaker-related subfamily, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369769 KCNA3-001 ENSG00000177272 9606 - 1:110672465-110675033 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369769
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369769 0.025±0.00 2.629±0.00 0.131±0.00 0.823±0.00 0.685±0.46 1.440±1.23 0.082±0.03 0.435±0.34 0.432±0.11 1.674±0.00 0.090±0.00 0.337±0.35 0.108±0.07 0.226±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005244 TAS voltage-gated ion channel activity
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006811 IEA ion transport
GO:0006813 TAS potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 IEA voltage-gated potassium channel complex
GO:0015271 IEA outward rectifier potassium channel activity
GO:0016020 IEA membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0045121 IEA membrane raft
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052718 Kcna3-201 protein_coding Mus_musculus 0 2204
ENSDART00000131038 protein_coding Danio_rerio 0 455
ENSDART00000109628 KCNA3 (2 of 2)-201 protein_coding Danio_rerio 0 388
ENSMUST00000185333 Kcna6-201 protein_coding Mus_musculus 0 292
ENSMUST00000112242 Kcna6-003 protein_coding Mus_musculus 0 292
ENSMUST00000040751 Kcna6-001 nonsense_mediated_decay Mus_musculus 0 292
ENSDART00000009653 KCNA1A-201 protein_coding Danio_rerio 0 231

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