C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000009938 tcf12-002 ENSDARG00000004714 7955 - 7:53971789-54013591 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000009938
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000009938 8.710±0.00 6.913±3.52 1.672±0.23 0.299±0.00 11.167±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OZ CIL_0004OZ_0001 CGP 7:53887331-54164943
CIL_0004OY CIL_0004OY_0001 CGP 7:53971789-54206632

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034755 Tcf12-006 protein_coding Mus_musculus 0 405
ENSMUST00000183404 Tcf12-001 protein_coding Mus_musculus 0 405
ENSMUST00000183918 Tcf12-010 protein_coding Mus_musculus 0 405
ENSMUST00000184770 Tcf12-009 retained_intron Mus_musculus 0 405
ENSMUST00000184867 Tcf12-007 nonsense_mediated_decay Mus_musculus 0 405
ENST00000267811 TCF12-001 protein_coding Homo_sapiens 0 418
ENST00000333725 TCF12-002 protein_coding Homo_sapiens 0 418
ENST00000343827 TCF12-008 protein_coding Homo_sapiens 0 418
ENST00000438423 TCF12-025 protein_coding Homo_sapiens 0 418

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