C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transferrin receptor 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000021095 tfr1b-201 ENSDARG00000012552 7955 + 24:26431769-26445940 protein_coding

Danio rerio EnsemblZv9

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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000021095
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000021095 2.528±1.39 2.794±1.33 6.435±2.03 0.469±0.00 0.383±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CJ CIL_0007CJ_0001 CGP 24:26431769-26464992

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006508 IEA proteolysis
GO:0006879 IMP cellular iron ion homeostasis
GO:0008233 IEA peptidase activity
GO:0042541 IMP hemoglobin biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023486 Tfrc-001 protein_coding Mus_musculus 5e-17 95
ENSMUST00000128285 Tfrc-004 retained_intron Mus_musculus 4e-17 95
ENST00000360110 TFRC-001 protein_coding Homo_sapiens 2e-21 110
ENST00000392396 TFRC-002 protein_coding Homo_sapiens 2e-21 110
ENST00000420415 TFRC-003 protein_coding Homo_sapiens 2e-21 110

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