C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transferrin receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128285 Tfrc-004 ENSMUSG00000022797 10090 + 16:32624442-32632790 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000128285
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000128285 2.451±0.31 1.088±0.23 3.444±0.85 6.266±1.41 3.071±0.63 5.857±1.99 6.715±1.66 2.721±0.47 30.781±38.02 5.174±0.93 6.134±2.41 2.229±1.17 20.246±3.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QR CIL_0008QR_0002 VISTA 16:32268412-32870796
CIL_0007CJ CIL_0007CJ_0003 CGP 16:32608920-32683493

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000021095 tfr1b-201 protein_coding Danio_rerio 4e-17 95
ENSDART00000137851 tfr1b-001 protein_coding Danio_rerio 4e-17 95
ENST00000360110 TFRC-001 protein_coding Homo_sapiens 0 817
ENST00000392396 TFRC-002 protein_coding Homo_sapiens 0 817
ENST00000420415 TFRC-003 protein_coding Homo_sapiens 0 817
ENST00000463356 TFRC-016 processed_transcript Homo_sapiens 7e-32 141
ENST00000465288 TFRC-009 processed_transcript Homo_sapiens 7e-32 141
ENST00000475593 TFRC-011 retained_intron Homo_sapiens 0 337
ENST00000482479 TFRC-013 retained_intron Homo_sapiens 5e-38 161
ENST00000483983 TFRC-012 retained_intron Homo_sapiens 0 263

Loading