C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000022382 SCN3A-202 ENSDARG00000090724 7955 + 2:52578103-52636980 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000022382
Transcript ID Brain Heart Kidney Liver
ENSDART00000022382 0.124±0.01 0.023±0.00 0.162±0.00 0.019±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021056 Scn4a-001 protein_coding Mus_musculus 0 398
ENSMUST00000065196 Scn5a-201 protein_coding Mus_musculus 0 374
ENSMUST00000066432 Scn3a-201 protein_coding Mus_musculus 0 298
ENSMUST00000082209 Scn8a-201 protein_coding Mus_musculus 0 475
ENSMUST00000100069 Scn3a-001 protein_coding Mus_musculus 0 298
ENSMUST00000108908 Scn8a-203 protein_coding Mus_musculus 0 475
ENSMUST00000108909 Scn8a-204 protein_coding Mus_musculus 0 475
ENSMUST00000108910 Scn8a-205 protein_coding Mus_musculus 0 475
ENSMUST00000117911 Scn5a-001 protein_coding Mus_musculus 0 374
ENSMUST00000120420 Scn5a-002 protein_coding Mus_musculus 0 374
ENSMUST00000126837 Scn3a-002 protein_coding Mus_musculus 0 259
ENST00000283254 SCN3A-001 protein_coding Homo_sapiens 0 259
ENST00000360093 SCN3A-201 protein_coding Homo_sapiens 0 215
ENST00000409101 SCN3A-002 protein_coding Homo_sapiens 0 215
ENST00000435607 SCN4A-201 protein_coding Homo_sapiens 0 403
ENST00000440431 SCN3A-004 protein_coding Homo_sapiens 0 259
ENST00000453007 SCN3A-003 protein_coding Homo_sapiens 0.000002 58
ENST00000578147 SCN4A-001 protein_coding Homo_sapiens 0 403

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