C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: YTH domain family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000025171 ythdf1-001 ENSDARG00000016447 7955 + 8:23958060-23973195 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000025171
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000025171 10.359±2.74 3.954±2.11 3.668±0.48 2.270±0.00 4.643±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102570 Ythdf2-002 retained_intron Mus_musculus 0 374
ENSMUST00000152796 Ythdf2-001 protein_coding Mus_musculus 0 374
ENST00000373812 YTHDF2-001 protein_coding Homo_sapiens 0 385
ENST00000478283 YTHDF2-002 processed_transcript Homo_sapiens 0 385
ENST00000541996 YTHDF2-008 protein_coding Homo_sapiens 0 385
ENST00000542507 YTHDF2-201 protein_coding Homo_sapiens 0 385
ENST00000604759 RP11-407N17.6-001 processed_pseudogene Homo_sapiens 0 346
ENST00000621244 YTHDF2-202 protein_coding Homo_sapiens 0 377

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