C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: YTH domain family 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102570 Ythdf2-002 ENSMUSG00000040025 10090 - 4:132186750-132212105 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102570
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102570 6.280±0.69 2.242±0.37 4.117±1.61 10.968±1.28 6.938±6.07 2.238±0.53 3.788±0.91 3.730±1.35 2.476±1.82 3.253±1.03 2.639±0.78 5.667±5.02 12.823±5.03 5.104±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0002 VISTA 4:131775516-132379227

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000025171 ythdf1-001 protein_coding Danio_rerio 0 374
ENST00000373812 YTHDF2-001 protein_coding Homo_sapiens 0 2981
ENST00000468863 YTHDF2-005 processed_transcript Homo_sapiens 0 785
ENST00000474884 YTHDF2-003 protein_coding Homo_sapiens 0 929
ENST00000475796 YTHDF2-004 processed_transcript Homo_sapiens 0 488
ENST00000476976 YTHDF2-007 processed_transcript Homo_sapiens 0 918
ENST00000478283 YTHDF2-002 processed_transcript Homo_sapiens 0 3044
ENST00000496288 YTHDF2-006 protein_coding Homo_sapiens 0 1062
ENST00000541996 YTHDF2-008 protein_coding Homo_sapiens 0 2931
ENST00000542507 YTHDF2-201 protein_coding Homo_sapiens 0 2981
ENST00000604759 RP11-407N17.6-001 processed_pseudogene Homo_sapiens 0 1895
ENST00000621244 YTHDF2-202 protein_coding Homo_sapiens 0 2968

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