C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000026701 tubg1-001 ENSDARG00000015610 7955 - 3:37054585-37077400 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000026701
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000026701 13.078±5.47 4.703±4.72 4.164±3.82 0.478±0.00 4.282±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000930 IEA gamma-tubulin complex
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0007020 IEA microtubule nucleation
GO:0031122 IEA cytoplasmic microtubule organization
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043654 Tubg2-001 protein_coding Mus_musculus 0 1282
ENSMUST00000043680 Tubg1-001 protein_coding Mus_musculus 0 1266
ENSMUST00000137844 Tubg1-002 processed_transcript Mus_musculus 0 381
ENST00000251412 TUBG2-001 protein_coding Homo_sapiens 0 1221
ENST00000251413 TUBG1-001 protein_coding Homo_sapiens 0 1266
ENST00000588870 TUBG2-002 retained_intron Homo_sapiens 0 776
ENST00000589688 TUBG1-005 nonsense_mediated_decay Homo_sapiens 0 815

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