C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRY-box containing gene 21a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000049339 sox21a-001 ENSDARG00000031664 7955 + 6:7331030-7332158 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverENSDART00000049339
Transcript ID Brain Kidney Liver
ENSDART00000049339 0.295±0.12 3.124±0.00 0.039±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099151 Sox2-001 protein_coding Mus_musculus 4.00001e-40 171
ENSMUST00000170662 Sox21-001 protein_coding Mus_musculus 0 207
ENSMUST00000180353 Sox1-001 protein_coding Mus_musculus 9.94922e-44 183
ENST00000325404 SOX2-001 protein_coding Homo_sapiens 9.00054e-42 176
ENST00000330949 SOX1-001 protein_coding Homo_sapiens 9.99967e-42 176
ENST00000376945 SOX21-001 protein_coding Homo_sapiens 0 209

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