C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000060545 dennd5a-201 ENSDARG00000017006 7955 - 7:66834169-66953970 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000060545
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000060545 22.036±0.00 9.776±4.39 0.874±0.31 0.458±0.00 2.000±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HO CIL_0001HO_0001 CGP 7:66834169-66975055

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016020 IBA membrane
GO:0017112 IBA Rab guanyl-nucleotide exchange factor activity
GO:0032313 IBA regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080437 Dennd5a-001 protein_coding Mus_musculus 0 1825
ENSMUST00000106722 Dennd5a-002 protein_coding Mus_musculus 0 1753
ENST00000328194 DENND5A-001 protein_coding Homo_sapiens 0 1905
ENST00000524446 DENND5A-011 protein_coding Homo_sapiens 0 351
ENST00000526707 DENND5A-002 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000527700 DENND5A-004 retained_intron Homo_sapiens 0 992
ENST00000530044 DENND5A-003 protein_coding Homo_sapiens 0 1783
ENST00000531580 DENND5A-012 retained_intron Homo_sapiens 0 274

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