C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin A-52 residue ribosomal protein fusion product 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000060745 uba52-001 ENSDARG00000041435 7955 - 2:56552145-56561814 protein_coding

Danio rerio EnsemblZv9

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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000060745
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000060745 1371.293±929.88 4886.775±2755.81 1967.230±2769.32 761.335±0.00 1139.700±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IEA protein binding
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108707 Ubc-003 protein_coding Mus_musculus 0 243
ENSMUST00000136312 Ubc-001 protein_coding Mus_musculus 0 243
ENSMUST00000156249 Ubc-002 protein_coding Mus_musculus 0 243
ENST00000339647 UBC-001 protein_coding Homo_sapiens 0 259
ENST00000430157 UBA52-002 protein_coding Homo_sapiens 0 414
ENST00000442744 UBA52-001 protein_coding Homo_sapiens 0 414
ENST00000536769 UBC-007 protein_coding Homo_sapiens 0 259
ENST00000538617 UBC-003 protein_coding Homo_sapiens 0 259
ENST00000546120 UBC-201 protein_coding Homo_sapiens 0 259
ENST00000594527 UBA52-013 protein_coding Homo_sapiens 0 220
ENST00000595158 UBA52-009 protein_coding Homo_sapiens 0 414
ENST00000595683 UBA52-004 protein_coding Homo_sapiens 0 414
ENST00000596272 UBA52-012 protein_coding Homo_sapiens 0 252
ENST00000596273 UBA52-003 protein_coding Homo_sapiens 0 414
ENST00000596304 UBA52-005 protein_coding Homo_sapiens 0 414
ENST00000597451 UBA52-011 protein_coding Homo_sapiens 0 414
ENST00000598780 UBA52-008 protein_coding Homo_sapiens 0 414
ENST00000599551 UBA52-010 protein_coding Homo_sapiens 0 414
ENST00000599595 UBA52-014 protein_coding Homo_sapiens 0 414

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