C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small G protein signaling modulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000060946 SGSM1 (2 of 2)-201 ENSDARG00000075376 7955 + 10:1665488-1706385 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000060946
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000060946 10.261±4.82 0.094±0.06 0.048±0.02 0.012±0.00 0.741±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048112 Sgsm1-001 protein_coding Mus_musculus 0 597
ENSMUST00000057209 Sgsm1-004 protein_coding Mus_musculus 0 597
ENST00000400358 SGSM1-001 protein_coding Homo_sapiens 0 601
ENST00000400359 SGSM1-004 protein_coding Homo_sapiens 0 601
ENST00000473458 SGSM1-002 retained_intron Homo_sapiens 0 601
ENST00000480523 SGSM1-003 retained_intron Homo_sapiens 0 601
ENST00000610372 SGSM1-201 protein_coding Homo_sapiens 0 601

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