C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: splicing factor 3b, subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000078568 sf3b1-001 ENSDARG00000056138 7955 - 9:33194931-33210425 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000078568
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000078568 68.271±19.41 46.919±17.38 65.487±18.24 3.921±0.00 16.517±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042O CIL_00042O_0001 CGP 9:33139641-33210425
CIL_00042R CIL_00042R_0001 CGP 9:33194931-33221753

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0014032 IMP neural crest cell development
GO:0030318 IGI melanocyte differentiation
GO:0042981 IGI regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027127 Sf3b1-001 protein_coding Mus_musculus 0 2278
ENST00000335508 SF3B1-001 protein_coding Homo_sapiens 0 2350

Loading