C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00042R_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000056138-ENSDARG00000056141 | CGP | 7955 | 9:33194931-33221753  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000056138  (sf3b1)splicing factor 3b, subunit 1 |
ENSDART00000078568 (sf3b1-001)
|
33194931-33210425 | protein_coding | |
|
ENSDART00000141105 (sf3b1-002)
|
33207687-33208571 | retained_intron | ||
|
ENSDARG00000056141 (coq10b) coenzyme Q10 homolog B (S. cerevisiae) |
ENSDART00000078576 (coq10b-001)
|
33211682-33221753 | protein_coding | |
|
ENSDART00000131596 (coq10b-002)
|
33217363-33220560 | processed_transcript | ||
| CIL_00042R_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000115524-ENSG00000115520 | CGP | 9606 | 2:197389784-197475308 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000115520 (COQ10B) coenzyme Q10 homolog B (S. cerevisiae) |
ENST00000263960 (COQ10B-001)
|
197453423-197475308 | protein_coding | |
|
ENST00000409010 (COQ10B-002)
|
197453794-197474410 | protein_coding | ||
|
ENST00000409398 (COQ10B-003)
|
197453493-197474168 | protein_coding | ||
|
ENST00000488445 (COQ10B-004)
|
197453764-197459997 | processed_transcript | ||
|
ENSG00000115524 (SF3B1) splicing factor 3b, subunit 1, 155kDa |
ENST00000335508 (SF3B1-001)
|
197389784-197435091 | protein_coding | |
|
ENST00000409915 (SF3B1-005)
|
197416891-197435027 | protein_coding | ||
|
ENST00000414174 (SF3B1-003)
|
197420181-197435016 | nonsense_mediated_decay | ||
|
ENST00000414963 (SF3B1-014)
|
197418796-197435079 | protein_coding | ||
|
ENST00000424674 (SF3B1-012)
|
197393052-197399028 | protein_coding | ||
|
ENST00000462613 (SF3B1-013)
|
197402022-197402452 | processed_transcript | ||
|
ENST00000468925 (SF3B1-008)
|
197407936-197408694 | retained_intron | ||
|
ENST00000470268 (SF3B1-002)
|
197409783-197420115 | retained_intron | ||
|
ENST00000479532 (SF3B1-007)
|
197392255-197393351 | retained_intron | ||
|
ENST00000482158 (SF3B1-010)
|
197416594-197418962 | retained_intron | ||
|
ENST00000487698 (SF3B1-004)
|
197418796-197435079 | protein_coding | ||
|
ENST00000496458 (SF3B1-011)
|
197397954-197398772 | retained_intron | ||
|
ENSG00000202434 (SNORA4) Small nucleolar RNA SNORA4 |
ENST00000365564 (SNORA4.1-203)
|
197404718-197404854 | snoRNA | |
|
ENSG00000206836 (RNU6-1029P) RNA, U6 small nuclear 1029, pseudogene |
ENST00000384109 (RNU6-1029P-201)
|
197447745-197447851 | snRNA | |
| CIL_00042R_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000025982-ENSMUSG00000025981 | CGP | 10090 | 1:54985169-55072702 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000025981 (Coq10b) coenzyme Q10 homolog B (S. cerevisiae) |
ENSMUST00000027125 (Coq10b-001)
|
55052770-55072702 | protein_coding | |
|
ENSMUST00000087617 (Coq10b-004)
|
55052770-55071953 | protein_coding | ||
|
ENSMUST00000185474 (Coq10b-002)
|
55052869-55054093 | retained_intron | ||
|
ENSMUST00000185918 (Coq10b-003)
|
55059639-55061757 | retained_intron | ||
|
ENSMUSG00000025982 (Sf3b1) splicing factor 3b, subunit 1 |
ENSMUST00000027127 (Sf3b1-001)
|
54985169-55027481 | protein_coding | |
|
ENSMUST00000185429 (Sf3b1-005)
|
54988953-54992541 | retained_intron | ||
|
ENSMUST00000187500 (Sf3b1-003)
|
55003151-55027464 | retained_intron | ||
|
ENSMUST00000188419 (Sf3b1-008)
|
55015931-55016929 | retained_intron | ||
|
ENSMUST00000188859 (Sf3b1-006)
|
55007666-55015193 | retained_intron | ||
|
ENSMUST00000189051 (Sf3b1-007)
|
55015801-55027373 | processed_transcript | ||
|
ENSMUST00000190175 (Sf3b1-004)
|
54985173-54991115 | retained_intron | ||
|
ENSMUST00000191303 (Sf3b1-002)
|
55012252-55027394 | nonsense_mediated_decay | ||
|
ENSMUSG00000101122 (RP23-16N14.5) predicted gene, 17971 |
ENSMUST00000190239 (RP23-16N14.5-001)
|
55066264-55067069 | processed_pseudogene | |
Expression Patterns
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