C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PR domain containing 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000086053 prdm16-201 ENSDARG00000078324 7955 + 8:50254993-50706682 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000086053
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000086053 1.445±0.38 3.102±1.27 2.423±0.14 0.027±0.00 0.606±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0046872 IEA metal ion binding
GO:0060038 IMP cardiac muscle cell proliferation
GO:0060047 IMP heart contraction
GO:0061337 IGI cardiac conduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030902 Prdm16-001 protein_coding Mus_musculus 0 529
ENSMUST00000070313 Prdm16-003 protein_coding Mus_musculus 0 529
ENSMUST00000097759 Prdm16-007 protein_coding Mus_musculus 0 529
ENSMUST00000105636 Prdm16-004 protein_coding Mus_musculus 0 529
ENSMUST00000105637 Prdm16-002 protein_coding Mus_musculus 0 529
ENSMUST00000105638 Prdm16-006 protein_coding Mus_musculus 0 529
ENSMUST00000141164 Prdm16-005 processed_transcript Mus_musculus 0 529
ENSMUST00000145217 Prdm16-013 processed_transcript Mus_musculus 0 281
ENSMUST00000156069 Prdm16-012 processed_transcript Mus_musculus 0 281
ENST00000270722 PRDM16-001 protein_coding Homo_sapiens 0 510
ENST00000378391 PRDM16-003 protein_coding Homo_sapiens 0 510
ENST00000509860 PRDM16-002 protein_coding Homo_sapiens 0 510
ENST00000511072 PRDM16-007 protein_coding Homo_sapiens 0 510
ENST00000512462 PRDM16-009 processed_transcript Homo_sapiens 0 510
ENST00000514189 PRDM16-008 protein_coding Homo_sapiens 0 510

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