C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromobox homolog 5 (HP1 alpha homolog, Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000086985 cbx5-201 ENSDARG00000061187 7955 - 23:36349703-36357550 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000086985
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000086985 24.038±10.43 14.934±3.78 22.934±3.97 1.438±0.00 4.524±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TM CIL_0002TM_0001 CGP 23:36348765-36361962

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031862 Cbx3-002 protein_coding Mus_musculus 7e-27 126
ENSMUST00000081455 Gm10068-001 processed_pseudogene Mus_musculus 2e-27 126
ENSMUST00000094623 Cbx3-001 protein_coding Mus_musculus 4e-27 126
ENSMUST00000114445 Cbx3-004 protein_coding Mus_musculus 6e-27 126
ENSMUST00000114446 Cbx3-005 protein_coding Mus_musculus 6e-27 126
ENSMUST00000181108 Gm6984-001 processed_pseudogene Mus_musculus 3e-26 122
ENSMUST00000188772 Als2cr12-002 protein_coding Mus_musculus 5e-27 126

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