C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6984
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181108 Gm6984-001 ENSMUSG00000057886 10090 - 14:73955000-73955551 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000181108
Transcript ID Bladder Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000181108 0.621±0.55 4.373±4.93 3.876±0.00 0.314±0.15 0.604±0.69 0.376±0.00 2.456±2.31 0.062±0.02 1.017±1.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000086985 cbx5-201 protein_coding Danio_rerio 3e-26 122
ENSDART00000133259 cbx5-003 protein_coding Danio_rerio 3e-26 122
ENSDART00000142760 cbx5-005 protein_coding Danio_rerio 3e-26 122
ENSDART00000143340 cbx5-001 protein_coding Danio_rerio 3e-26 122
ENSDART00000147598 cbx5-006 protein_coding Danio_rerio 4e-24 115
ENST00000325243 CBX3P1-001 processed_pseudogene Homo_sapiens 0 623
ENST00000337620 CBX3-001 protein_coding Homo_sapiens 0 715
ENST00000396386 CBX3-002 protein_coding Homo_sapiens 0 715
ENST00000402326 CBX3P9-001 processed_pseudogene Homo_sapiens 0 660
ENST00000409747 CBX3-003 protein_coding Homo_sapiens 0 374
ENST00000430257 CBX3P6-001 processed_pseudogene Homo_sapiens 0 379
ENST00000456948 CBX3-004 protein_coding Homo_sapiens 0 274
ENST00000462165 CBX3-006 protein_coding Homo_sapiens 0 444
ENST00000481057 CBX3-005 retained_intron Homo_sapiens 0 477
ENST00000481300 CBX3-007 retained_intron Homo_sapiens 0 322
ENST00000497498 CBX3-008 processed_transcript Homo_sapiens 0 547
ENST00000508108 CBX3P3-001 processed_pseudogene Homo_sapiens 0 507
ENST00000532412 CBX3P8-001 processed_pseudogene Homo_sapiens 0 433
ENST00000538909 CBX3P4-001 transcribed_processed_pseudogene Homo_sapiens 0 322
ENST00000552017 CBX3P5-001 processed_pseudogene Homo_sapiens 0 538

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