C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10068
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081455 Gm10068-001 ENSMUSG00000059647 10090 + 1:58646688-58647239 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverENSMUST00000081455
Transcript ID Bladder Brain Liver
ENSMUST00000081455 0.882±0.00 0.688±0.09 0.776±0.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000086985 cbx5-201 protein_coding Danio_rerio 2e-27 126
ENSDART00000133259 cbx5-003 protein_coding Danio_rerio 2e-27 126
ENSDART00000142760 cbx5-005 protein_coding Danio_rerio 2e-27 126
ENSDART00000143340 cbx5-001 protein_coding Danio_rerio 2e-27 126
ENSDART00000147598 cbx5-006 protein_coding Danio_rerio 3e-25 119
ENST00000325243 CBX3P1-001 processed_pseudogene Homo_sapiens 0 628
ENST00000337620 CBX3-001 protein_coding Homo_sapiens 0 721
ENST00000396386 CBX3-002 protein_coding Homo_sapiens 0 721
ENST00000402326 CBX3P9-001 processed_pseudogene Homo_sapiens 0 665
ENST00000409747 CBX3-003 protein_coding Homo_sapiens 0 379
ENST00000430257 CBX3P6-001 processed_pseudogene Homo_sapiens 0 385
ENST00000456948 CBX3-004 protein_coding Homo_sapiens 0 274
ENST00000462165 CBX3-006 protein_coding Homo_sapiens 0 444
ENST00000481057 CBX3-005 retained_intron Homo_sapiens 0 483
ENST00000481300 CBX3-007 retained_intron Homo_sapiens 0 322
ENST00000497498 CBX3-008 processed_transcript Homo_sapiens 0 547
ENST00000508108 CBX3P3-001 processed_pseudogene Homo_sapiens 0 512
ENST00000532412 CBX3P8-001 processed_pseudogene Homo_sapiens 0 438
ENST00000538909 CBX3P4-001 transcribed_processed_pseudogene Homo_sapiens 0 316
ENST00000552017 CBX3P5-001 processed_pseudogene Homo_sapiens 0 544

Loading