C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U2 snRNP-associated SURP domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000087714 u2surp-201 ENSDARG00000061490 7955 - 2:26771548-26786400 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000087714
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000087714 27.645±5.78 10.986±4.17 20.834±3.04 2.126±0.00 10.368±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0006396 IEA RNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078374 U2surp-001 protein_coding Mus_musculus 0 760
ENSMUST00000079659 U2surp-002 protein_coding Mus_musculus 0 760
ENST00000461591 U2SURP-003 retained_intron Homo_sapiens 0 261
ENST00000463563 U2SURP-004 nonsense_mediated_decay Homo_sapiens 0 342
ENST00000473835 U2SURP-001 protein_coding Homo_sapiens 0 760
ENST00000488497 U2SURP-002 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000488587 U2SURP-012 retained_intron Homo_sapiens 0 261
ENST00000493598 U2SURP-022 protein_coding Homo_sapiens 0 749

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