C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000092726 atp2b2-201 ENSDARG00000063433 7955 + 11:1147343-1202524 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000092726
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000092726 49.175±0.00 0.121±0.05 0.157±0.00 0.173±0.00 5.865±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0005737 ISS cytoplasm
GO:0006812 IEA cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016787 IEA hydrolase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0030182 ISS neuron differentiation
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089003 Atp2b2-004 protein_coding Mus_musculus 0 1969
ENSMUST00000101044 Atp2b2-003 protein_coding Mus_musculus 0 1991
ENSMUST00000101045 Atp2b2-001 protein_coding Mus_musculus 0 1969
ENSMUST00000152831 Atp2b2-002 nonsense_mediated_decay Mus_musculus 0 1799
ENST00000263519 ATP2B3-201 protein_coding Homo_sapiens 0 1790
ENST00000349466 ATP2B3-002 protein_coding Homo_sapiens 0 1790
ENST00000352432 ATP2B2-001 protein_coding Homo_sapiens 0 2036
ENST00000359149 ATP2B3-006 protein_coding Homo_sapiens 0 1701
ENST00000360273 ATP2B2-201 protein_coding Homo_sapiens 0 2036
ENST00000370186 ATP2B3-001 protein_coding Homo_sapiens 0 1683
ENST00000383800 ATP2B2-002 protein_coding Homo_sapiens 0 2006
ENST00000393842 ATP2B3-004 protein_coding Homo_sapiens 0 1683
ENST00000397077 ATP2B2-005 protein_coding Homo_sapiens 0 2006
ENST00000452124 ATP2B2-003 protein_coding Homo_sapiens 0 2036
ENST00000460129 ATP2B2-004 nonsense_mediated_decay Homo_sapiens 0 1836
ENST00000460549 ATP2B3-003 processed_transcript Homo_sapiens 0 414

Loading