C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: serine/arginine-rich splicing factor 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000110646 srsf1b-201 ENSDARG00000017843 7955 - 21:38403760-38412580 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyENSDART00000110646
Transcript ID Heart Kidney
ENSDART00000110646 8.384±0.00 3.761±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039M CIL_00039M_0001 CGP 21:38392296-38412580

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258962 SRSF1-001 protein_coding Homo_sapiens 0 453
ENST00000581979 SRSF1-004 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000582730 SRSF1-003 protein_coding Homo_sapiens 0 375
ENST00000583741 SRSF1-005 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000584668 SRSF1-008 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000584773 SRSF1-002 protein_coding Homo_sapiens 0 453

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