C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077821 Arhgap39-001 ENSMUSG00000033697 10090 - 15:76723985-76818170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077821
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077821 3.077±1.51 5.658±1.54 0.874±0.03 17.038±10.43 3.713±2.01 10.751±2.60 1.143±0.43 1.339±0.48 1.132±0.59 3.788±1.82 0.260±0.06 11.330±2.67 1.306±0.13 4.341±2.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099W CIL_00099W_0002 VISTA 15:76709335-77309403
CIL_0000VV CIL_0000VV_0002 CGP 15:76723985-76871435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005856 IEA cytoskeleton
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000113684 arhgap39-201 protein_coding Danio_rerio 0 965
ENST00000276826 ARHGAP39-001 protein_coding Homo_sapiens 0 3121
ENST00000377307 ARHGAP39-002 protein_coding Homo_sapiens 0 2235
ENST00000528810 ARHGAP39-003 processed_transcript Homo_sapiens 0 520

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