C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family G (WHITE), member 4b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000115051 abcg4b-001 ENSDARG00000078068 7955 - 15:22841278-22861762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000115051
Transcript ID Brain Heart Kidney Muscle
ENSDART00000115051 0.859±0.43 0.240±0.24 0.052±0.01 0.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Q2 CIL_0006Q2_0001 CGP 15:22821573-22861762

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0016020 IEA membrane
GO:0016887 IEA ATPase activity
GO:0017111 IEA nucleoside-triphosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034648 Abcg4-003 protein_coding Mus_musculus 0 676
ENSMUST00000085979 Abcg4-004 retained_intron Mus_musculus 0 292
ENSMUST00000159385 Abcg4-005 retained_intron Mus_musculus 0 276
ENSMUST00000159997 Abcg4-009 retained_intron Mus_musculus 2.00386e-43 180
ENSMUST00000160323 Abcg4-002 processed_transcript Mus_musculus 0 593
ENSMUST00000161354 Abcg4-001 protein_coding Mus_musculus 0 676
ENSMUST00000162783 Abcg4-010 nonsense_mediated_decay Mus_musculus 0 252
ENST00000343687 ABCG1-005 protein_coding Homo_sapiens 0 226
ENST00000347800 ABCG1-004 protein_coding Homo_sapiens 0 226
ENST00000361802 ABCG1-006 protein_coding Homo_sapiens 0 226
ENST00000398437 ABCG1-008 protein_coding Homo_sapiens 0 226
ENST00000398449 ABCG1-001 protein_coding Homo_sapiens 0 226
ENST00000398457 ABCG1-002 protein_coding Homo_sapiens 0 226
ENST00000462050 ABCG1-003 processed_transcript Homo_sapiens 0 226
ENST00000472587 ABCG1-007 retained_intron Homo_sapiens 0 226
ENST00000496783 ABCG1-009 retained_intron Homo_sapiens 0 198

Loading