C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family G (WHITE), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161354 Abcg4-001 ENSMUSG00000032131 10090 - 9:44273190-44288615 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000161354
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000161354 1.068±0.35 8.051±1.00 1.344±0.01 5.361±2.32 0.275±0.08 0.541±0.19 0.058±0.00 0.061±0.00 9.365±4.86 0.162±0.02 2.149±0.78 0.819±0.21 0.144±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Q2 CIL_0006Q2_0002 CGP 9:44252713-44288615

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0016020 IEA membrane
GO:0016887 IEA ATPase activity
GO:0042803 IEA protein homodimerization activity
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115051 abcg4b-001 protein_coding Danio_rerio 0 676
ENSDART00000092809 abcg1-001 protein_coding Danio_rerio 0 298
ENSDART00000152213 abcg4b-003 retained_intron Danio_rerio 0 276
ENSDART00000152583 abcg4b-002 retained_intron Danio_rerio 3e-29 135
ENST00000343687 ABCG1-005 protein_coding Homo_sapiens 0 381
ENST00000347800 ABCG1-004 protein_coding Homo_sapiens 0 381
ENST00000361802 ABCG1-006 protein_coding Homo_sapiens 0 381
ENST00000398437 ABCG1-008 protein_coding Homo_sapiens 0 361
ENST00000398449 ABCG1-001 protein_coding Homo_sapiens 0 381
ENST00000398457 ABCG1-002 protein_coding Homo_sapiens 0 381
ENST00000450121 ABCG1-010 protein_coding Homo_sapiens 3.00018e-42 176
ENST00000462050 ABCG1-003 processed_transcript Homo_sapiens 0 381
ENST00000524604 ABCG4-005 protein_coding Homo_sapiens 0 656
ENST00000533694 ABCG4-004 retained_intron Homo_sapiens 0 1267
ENST00000534402 ABCG4-006 retained_intron Homo_sapiens 0 191
ENST00000615496 ABCG4-002 protein_coding Homo_sapiens 0 2745
ENST00000619701 ABCG4-001 protein_coding Homo_sapiens 0 3140
ENST00000622721 ABCG4-003 protein_coding Homo_sapiens 0 2822

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