C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family G (WHITE), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034648 Abcg4-003 ENSMUSG00000032131 10090 - 9:44273188-44287544 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034648
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034648 0.939±0.49 5.835±1.23 1.138±0.28 2.873±0.86 0.885±0.11 0.214±0.10 0.118±0.04 4.278±2.69 0.124±0.05 0.214±0.12 2.204±1.17 0.322±0.00 0.108±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Q2 CIL_0006Q2_0002 CGP 9:44252713-44288615

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0016020 IEA membrane
GO:0016887 IEA ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115051 abcg4b-001 protein_coding Danio_rerio 0 676
ENSDART00000092809 abcg1-001 protein_coding Danio_rerio 0 298
ENSDART00000152213 abcg4b-003 retained_intron Danio_rerio 0 276
ENSDART00000152583 abcg4b-002 retained_intron Danio_rerio 2e-29 135
ENST00000343687 ABCG1-005 protein_coding Homo_sapiens 0 381
ENST00000347800 ABCG1-004 protein_coding Homo_sapiens 0 381
ENST00000361802 ABCG1-006 protein_coding Homo_sapiens 0 381
ENST00000398437 ABCG1-008 protein_coding Homo_sapiens 0 361
ENST00000398449 ABCG1-001 protein_coding Homo_sapiens 0 381
ENST00000398457 ABCG1-002 protein_coding Homo_sapiens 0 381
ENST00000450121 ABCG1-010 protein_coding Homo_sapiens 3.00018e-42 176
ENST00000462050 ABCG1-003 processed_transcript Homo_sapiens 0 381
ENST00000524604 ABCG4-005 protein_coding Homo_sapiens 0 660
ENST00000533694 ABCG4-004 retained_intron Homo_sapiens 0 1267
ENST00000534402 ABCG4-006 retained_intron Homo_sapiens 0 191
ENST00000615496 ABCG4-002 protein_coding Homo_sapiens 0 2747
ENST00000619701 ABCG4-001 protein_coding Homo_sapiens 0 3114
ENST00000622721 ABCG4-003 protein_coding Homo_sapiens 0 2854

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