C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family G (WHITE), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159385 Abcg4-005 ENSMUSG00000032131 10090 - 9:44273188-44278614 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000159385
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000159385 0.530±0.35 5.180±0.09 0.202±0.05 0.686±0.00 0.026±0.00 1.158±1.97 0.080±0.00 0.130±0.01 1.252±0.81 0.205±0.18 0.046±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Q2 CIL_0006Q2_0002 CGP 9:44252713-44288615

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000152213 abcg4b-003 retained_intron Danio_rerio 0 276
ENSDART00000115051 abcg4b-001 protein_coding Danio_rerio 0 276
ENSDART00000152583 abcg4b-002 retained_intron Danio_rerio 2e-29 135
ENST00000533694 ABCG4-004 retained_intron Homo_sapiens 0 499
ENST00000615496 ABCG4-002 protein_coding Homo_sapiens 0 1273
ENST00000619701 ABCG4-001 protein_coding Homo_sapiens 0 1640
ENST00000622721 ABCG4-003 protein_coding Homo_sapiens 0 1349

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