C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006Q2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000073724-ENSDARG00000078068 CGP 7955 15:22821573-22861762
GeneTranscriptPositionBiotype
ENSDARG00000073724 (nlrx1)
NLR family member X1
ENSDART00000114416 (nlrx1-201) 22821576-22835636 protein_coding
ENSDART00000152460 (nlrx1-002) 22822670-22828599 protein_coding
ENSDART00000152706 (nlrx1-001) 22821573-22839300 protein_coding
ENSDARG00000078068 (abcg4b)
ATP-binding cassette, sub-family G (WHITE), member 4b
ENSDART00000115051 (abcg4b-001) 22841278-22861762 protein_coding
ENSDART00000152213 (abcg4b-003) 22842184-22849158 retained_intron
ENSDART00000152583 (abcg4b-002) 22845943-22849122 retained_intron
CIL_0006Q2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032109-ENSMUSG00000032131 CGP 10090 9:44252713-44288615
GeneTranscriptPositionBiotype
ENSMUSG00000032109 (Nlrx1)
NLR family member X1
ENSMUST00000034621 (Nlrx1-201) 44252713-44268491 protein_coding
ENSMUST00000168499 (Nlrx1-202) 44252713-44268599 protein_coding
ENSMUST00000169651 (Nlrx1-203) 44252713-44268187 protein_coding
ENSMUSG00000032131 (Abcg4)
ATP-binding cassette, sub-family G (WHITE), member 4
ENSMUST00000034648 (Abcg4-003) 44273188-44287544 protein_coding
ENSMUST00000085979 (Abcg4-004) 44274452-44279838 retained_intron
ENSMUST00000159385 (Abcg4-005) 44273188-44278614 retained_intron
ENSMUST00000159997 (Abcg4-009) 44277503-44279791 retained_intron
ENSMUST00000160323 (Abcg4-002) 44277071-44287536 processed_transcript
ENSMUST00000160384 (Abcg4-007) 44281909-44288138 protein_coding
ENSMUST00000161206 (Abcg4-008) 44280648-44281658 retained_intron
ENSMUST00000161354 (Abcg4-001) 44273190-44288615 protein_coding
ENSMUST00000161408 (Abcg4-006) 44281846-44288357 protein_coding
ENSMUST00000162783 (Abcg4-010) 44275095-44279600 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Q2_0001ENSDARG00000073724ENSDART00000114416ENSDART00000152460ENSDART00000152706ENSDARG00000078068ENSDART00000115051ENSDART00000152213ENSDART00000152583CIL_0006Q2_0002ENSMUSG00000032109ENSMUST00000034621ENSMUST00000168499ENSMUST00000169651ENSMUSG00000032131ENSMUST00000034648ENSMUST00000085979ENSMUST00000159385ENSMUST00000159997ENSMUST00000160323ENSMUST00000160384ENSMUST00000161206ENSMUST00000161354ENSMUST00000161408ENSMUST00000162783
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Q2_0001ENSDARG00000073724ENSDART00000114416ENSDART00000152460ENSDART00000152706ENSDARG00000078068ENSDART00000115051ENSDART00000152213CIL_0006Q2_0002ENSMUSG00000032109ENSMUST00000034621ENSMUST00000168499ENSMUST00000169651ENSMUSG00000032131ENSMUST00000034648ENSMUST00000085979ENSMUST00000159385ENSMUST00000160323ENSMUST00000160384ENSMUST00000161206ENSMUST00000161354ENSMUST00000161408ENSMUST00000162783
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000073724 ENSDART00000114416 N/A N/A N/A 0.938±0.00 N/A N/A 5.263±4.05 2.016±1.15 0.271±0.00 N/A 1.674±0.00 N/A N/A N/A
ENSDART00000152460 N/A N/A N/A N/A N/A N/A 4.477±0.00 N/A N/A N/A 1.996±0.00 N/A N/A N/A
ENSDART00000152706 N/A N/A N/A 2.424±1.29 N/A N/A 0.799±0.42 1.858±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000078068 ENSDART00000115051 N/A N/A N/A 0.859±0.43 N/A N/A 0.240±0.24 0.052±0.01 N/A N/A 0.057±0.00 N/A N/A N/A
ENSDART00000152213 N/A N/A N/A N/A N/A N/A 0.528±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032109 ENSMUST00000034621 N/A N/A N/A 0.424±0.00 N/A N/A N/A N/A 0.233±0.00 N/A N/A N/A 0.923±0.43 0.358±0.00
ENSMUST00000168499 3.376±1.10 7.223±0.70 1.943±0.03 0.854±0.08 4.294±1.85 10.271±1.35 2.428±1.29 1.800±0.84 1.598±1.10 3.397±1.03 1.861±0.00 3.435±1.65 2.323±0.97 0.389±0.10
ENSMUST00000169651 1.598±0.24 2.946±1.02 N/A 1.553±0.00 2.062±0.83 3.000±0.00 2.054±0.61 1.400±0.55 0.930±0.52 1.740±0.00 3.213±1.06 2.543±0.97 2.516±0.00 0.238±0.10
ENSMUSG00000032131 ENSMUST00000034648 0.939±0.49 5.835±1.23 1.138±0.28 2.873±0.86 N/A 0.885±0.11 0.214±0.10 0.118±0.04 4.278±2.69 0.124±0.05 0.214±0.12 2.204±1.17 0.322±0.00 0.108±0.00
ENSMUST00000085979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.00 1.738±0.00 N/A N/A
ENSMUST00000159385 0.530±0.35 5.180±0.09 N/A N/A 0.202±0.05 0.686±0.00 N/A 0.026±0.00 1.158±1.97 0.080±0.00 0.130±0.01 1.252±0.81 0.205±0.18 0.046±0.03
ENSMUST00000159997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.943±0.00 N/A N/A
ENSMUST00000160384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.791±0.00 N/A
ENSMUST00000161206 N/A N/A N/A N/A 0.749±0.00 N/A N/A N/A 0.051±0.00 N/A 0.245±0.00 N/A 0.366±0.00 N/A
ENSMUST00000161354 1.068±0.35 8.051±1.00 1.344±0.01 5.361±2.32 0.275±0.08 0.541±0.19 0.058±0.00 0.061±0.00 9.365±4.86 0.162±0.02 N/A 2.149±0.78 0.819±0.21 0.144±0.06
ENSMUST00000161408 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.455±0.00 N/A N/A N/A N/A
ENSMUST00000162783 N/A N/A N/A N/A 1.257±0.00 N/A N/A N/A N/A 0.335±0.00 0.261±0.10 N/A 0.082±0.00 0.176±0.00

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