C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: YTH domain family 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000122294 ythdf3-001 ENSDARG00000057939 7955 + 24:24893699-24908298 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000122294
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000122294 2.308±0.77 3.477±0.96 2.278±1.50 1.429±0.00 4.934±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LP CIL_0005LP_0001 CGP 24:24893699-25071294

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037299 Ythdf1-001 protein_coding Mus_musculus 0 409
ENSMUST00000108345 Ythdf3-201 protein_coding Mus_musculus 0 531
ENSMUST00000108346 Ythdf3-202 protein_coding Mus_musculus 0 531
ENSMUST00000108876 Ythdf1-002 protein_coding Mus_musculus 0 409
ENST00000370339 YTHDF1-001 protein_coding Homo_sapiens 0 425
ENST00000518373 YTHDF3-013 processed_transcript Homo_sapiens 0 228
ENST00000539294 YTHDF3-001 protein_coding Homo_sapiens 0 521
ENST00000615676 YTHDF3-003 nonsense_mediated_decay Homo_sapiens 0 521
ENST00000617200 YTHDF3-201 protein_coding Homo_sapiens 0 521
ENST00000621413 YTHDF3-014 protein_coding Homo_sapiens 0 521
ENST00000621820 YTHDF3-002 protein_coding Homo_sapiens 0 521
ENST00000621890 YTHDF3-006 protein_coding Homo_sapiens 0 521
ENST00000621957 YTHDF3-015 protein_coding Homo_sapiens 0 521
ENST00000623280 YTHDF3-202 protein_coding Homo_sapiens 0 521

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