C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB6A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000129190 rab6a-002 ENSDARG00000090667 7955 + 10:37939728-37954699 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverENSDART00000129190
Transcript ID Brain Heart Liver
ENSDART00000129190 1.853±0.00 2.691±0.47 0.222±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZZ CIL_0002ZZ_0001 CGP 10:37928081-37955780

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032946 Rab6a-001 protein_coding Mus_musculus 0 547
ENSMUST00000098252 Rab6a-002 protein_coding Mus_musculus 0 625
ENSMUST00000107048 Rab6a-003 protein_coding Mus_musculus 0 568
ENST00000310653 RAB6A-001 protein_coding Homo_sapiens 0 606
ENST00000536566 RAB6A-201 protein_coding Homo_sapiens 0 562
ENST00000541973 RAB6A-006 protein_coding Homo_sapiens 0 562

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