C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: runt-related transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000130697 RUNX1 (2 of 2)-201 ENSDARG00000087646 7955 - 1:1088740-1093175 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000130697
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000130697 0.676±0.14 0.994±0.00 2.059±0.00 0.084±0.00 1.622±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023673 Runx1-001 protein_coding Mus_musculus 0 267
ENSMUST00000113956 Runx1-003 protein_coding Mus_musculus 0 267
ENSMUST00000168195 Runx1-004 protein_coding Mus_musculus 0 267
ENSMUST00000189126 Runx1-005 retained_intron Mus_musculus 0 268
ENST00000300305 RUNX1-002 protein_coding Homo_sapiens 0 333
ENST00000344691 RUNX1-001 protein_coding Homo_sapiens 0 333
ENST00000358356 RUNX1-005 protein_coding Homo_sapiens 0 333
ENST00000399237 RUNX1-012 protein_coding Homo_sapiens 0 333
ENST00000399240 RUNX1-009 protein_coding Homo_sapiens 0 333
ENST00000437180 RUNX1-201 protein_coding Homo_sapiens 0 333
ENST00000455571 RUNX1-010 protein_coding Homo_sapiens 0 324

Loading